Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOBP04114 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.35□□□□□ -0.43
APOBP04114 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 AP000523.1-201ENST00000398242 1049 ntBASIC12.35□□□□□ -0.43
APOBP04114 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.35□□□□□ -0.43
APOBP04114 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
APOBP04114 NPAP1P7-201ENST00000613027 823 ntBASIC12.35□□□□□ -0.43
APOBP04114 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC12.35□□□□□ -0.43
APOBP04114 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
APOBP04114 AC116351.2-201ENST00000606540 1585 ntBASIC12.35□□□□□ -0.43
APOBP04114 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 AP002469.2-201ENST00000531724 424 ntBASIC12.35□□□□□ -0.43
APOBP04114 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
APOBP04114 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.35□□□□□ -0.43
APOBP04114 AC141257.4-201ENST00000634557 245 ntBASIC12.35□□□□□ -0.43
APOBP04114 AC136944.6-201ENST00000634818 245 ntBASIC12.35□□□□□ -0.43
APOBP04114 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.35□□□□□ -0.43
APOBP04114 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.35□□□□□ -0.43
APOBP04114 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOBP04114 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.34□□□□□ -0.43
APOBP04114 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
APOBP04114 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.34□□□□□ -0.43
APOBP04114 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.34□□□□□ -0.43
APOBP04114 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.34□□□□□ -0.43
APOBP04114 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.34□□□□□ -0.43
APOBP04114 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC12.34□□□□□ -0.43
APOBP04114 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.34□□□□□ -0.43
APOBP04114 TSPY17P-201ENST00000450329 467 ntBASIC12.34□□□□□ -0.43
APOBP04114 PRSS44-201ENST00000515154 1146 ntBASIC12.34□□□□□ -0.43
APOBP04114 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.34□□□□□ -0.43
APOBP04114 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC12.34□□□□□ -0.43
APOBP04114 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
APOBP04114 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC12.34□□□□□ -0.43
APOBP04114 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.34□□□□□ -0.43
APOBP04114 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.34□□□□□ -0.43
APOBP04114 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.34□□□□□ -0.43
APOBP04114 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 AL023973.1-201ENST00000624619 620 ntBASIC12.34□□□□□ -0.43
APOBP04114 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOBP04114 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
APOBP04114 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
APOBP04114 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
APOBP04114 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
APOBP04114 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOBP04114 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.33□□□□□ -0.44
APOBP04114 AL512604.3-201ENST00000569583 964 ntBASIC12.33□□□□□ -0.44
APOBP04114 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.33□□□□□ -0.44
APOBP04114 MIR4674-201ENST00000582457 87 ntBASIC12.33□□□□□ -0.44
APOBP04114 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.33□□□□□ -0.44
APOBP04114 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
APOBP04114 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.33□□□□□ -0.44
APOBP04114 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOBP04114 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOBP04114 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
APOBP04114 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
APOBP04114 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.33□□□□□ -0.44
APOBP04114 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOBP04114 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOBP04114 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC12.33□□□□□ -0.44
APOBP04114 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOBP04114 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.33□□□□□ -0.44
APOBP04114 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.33□□□□□ -0.44
APOBP04114 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOBP04114 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.33□□□□□ -0.44
APOBP04114 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC12.33□□□□□ -0.44
APOBP04114 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOBP04114 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOBP04114 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOBP04114 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
APOBP04114 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOBP04114 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC12.32□□□□□ -0.44
APOBP04114 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBP04114 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC12.32□□□□□ -0.44
APOBP04114 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBP04114 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
APOBP04114 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBP04114 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms