Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ZBED1O96006 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZBED1O96006 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZBED1O96006 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
ZBED1O96006 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.79■□□□□ 0.92
ZBED1O96006 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
ZBED1O96006 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZBED1O96006 AL691432.2-201ENST00000607222 2038 ntBASIC20.79■□□□□ 0.92
ZBED1O96006 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ZBED1O96006 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZBED1O96006 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
ZBED1O96006 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.79■□□□□ 0.92
ZBED1O96006 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.79■□□□□ 0.92
ZBED1O96006 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.79■□□□□ 0.92
ZBED1O96006 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.79■□□□□ 0.92
ZBED1O96006 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.79■□□□□ 0.92
ZBED1O96006 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
ZBED1O96006 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.79■□□□□ 0.92
ZBED1O96006 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.79■□□□□ 0.92
ZBED1O96006 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
ZBED1O96006 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZBED1O96006 AL359736.2-201ENST00000621992 437 ntBASIC20.79■□□□□ 0.92
ZBED1O96006 AC018553.1-201ENST00000616682 1458 ntBASIC20.79■□□□□ 0.92
ZBED1O96006 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZBED1O96006 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZBED1O96006 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZBED1O96006 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.78■□□□□ 0.92
ZBED1O96006 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZBED1O96006 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.78■□□□□ 0.92
ZBED1O96006 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ZBED1O96006 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.78■□□□□ 0.92
ZBED1O96006 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZBED1O96006 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.78■□□□□ 0.92
ZBED1O96006 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ZBED1O96006 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZBED1O96006 AC239809.2-201ENST00000415381 517 ntBASIC20.78■□□□□ 0.92
ZBED1O96006 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ZBED1O96006 AL158047.1-201ENST00000445918 881 ntBASIC20.78■□□□□ 0.92
ZBED1O96006 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.78■□□□□ 0.92
ZBED1O96006 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZBED1O96006 AFG3L1P-217ENST00000557444 2447 ntBASIC20.78■□□□□ 0.92
ZBED1O96006 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZBED1O96006 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZBED1O96006 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZBED1O96006 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.78■□□□□ 0.92
ZBED1O96006 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.78■□□□□ 0.92
ZBED1O96006 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZBED1O96006 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ZBED1O96006 TFP1-202ENST00000475455 1573 ntBASIC20.77■□□□□ 0.92
ZBED1O96006 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZBED1O96006 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ZBED1O96006 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.77■□□□□ 0.92
ZBED1O96006 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZBED1O96006 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.77■□□□□ 0.92
ZBED1O96006 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ZBED1O96006 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.77■□□□□ 0.92
ZBED1O96006 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.77■□□□□ 0.92
ZBED1O96006 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.77■□□□□ 0.92
ZBED1O96006 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
ZBED1O96006 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ZBED1O96006 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.77■□□□□ 0.92
ZBED1O96006 AC124016.1-201ENST00000609552 612 ntBASIC20.77■□□□□ 0.92
ZBED1O96006 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZBED1O96006 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.77■□□□□ 0.92
ZBED1O96006 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.77■□□□□ 0.92
ZBED1O96006 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZBED1O96006 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZBED1O96006 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
ZBED1O96006 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.76■□□□□ 0.91
ZBED1O96006 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZBED1O96006 TCF3P1-201ENST00000423021 1937 ntBASIC20.76■□□□□ 0.91
ZBED1O96006 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
ZBED1O96006 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZBED1O96006 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.76■□□□□ 0.91
ZBED1O96006 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZBED1O96006 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZBED1O96006 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZBED1O96006 KRASP1-201ENST00000407852 552 ntBASIC20.76■□□□□ 0.91
ZBED1O96006 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.76■□□□□ 0.91
ZBED1O96006 AC133681.1-201ENST00000465482 601 ntBASIC20.76■□□□□ 0.91
ZBED1O96006 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.76■□□□□ 0.91
ZBED1O96006 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
ZBED1O96006 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.76■□□□□ 0.91
ZBED1O96006 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.76■□□□□ 0.91
ZBED1O96006 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZBED1O96006 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.76■□□□□ 0.91
ZBED1O96006 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.76■□□□□ 0.91
ZBED1O96006 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZBED1O96006 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ZBED1O96006 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ZBED1O96006 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.76■□□□□ 0.91
ZBED1O96006 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZBED1O96006 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.76■□□□□ 0.91
ZBED1O96006 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.76■□□□□ 0.91
ZBED1O96006 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZBED1O96006 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZBED1O96006 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZBED1O96006 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZBED1O96006 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZBED1O96006 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms