Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 AP006294.2-201ENST00000641667 209 ntBASIC18.18■□□□□ 0.5
ARHGEF9O43307 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 AC099778.1-201ENST00000568593 1911 ntBASIC18.17■□□□□ 0.5
ARHGEF9O43307 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.17■□□□□ 0.5
ARHGEF9O43307 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
ARHGEF9O43307 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF9O43307 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF9O43307 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.17■□□□□ 0.5
ARHGEF9O43307 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF9O43307 SMG8-203ENST00000578922 2178 ntBASIC18.17■□□□□ 0.5
ARHGEF9O43307 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
ARHGEF9O43307 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.17■□□□□ 0.5
ARHGEF9O43307 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.17■□□□□ 0.5
ARHGEF9O43307 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.17■□□□□ 0.5
ARHGEF9O43307 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.17■□□□□ 0.5
ARHGEF9O43307 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.17■□□□□ 0.5
ARHGEF9O43307 TERF1P5-201ENST00000477545 1207 ntBASIC18.17■□□□□ 0.5
ARHGEF9O43307 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.17■□□□□ 0.5
ARHGEF9O43307 AC008687.6-201ENST00000596318 630 ntBASIC18.17■□□□□ 0.5
ARHGEF9O43307 FAM21FP-204ENST00000608637 956 ntBASIC18.17■□□□□ 0.5
ARHGEF9O43307 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF9O43307 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF9O43307 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.17■□□□□ 0.5
ARHGEF9O43307 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF9O43307 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.17■□□□□ 0.5
ARHGEF9O43307 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF9O43307 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF9O43307 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.16■□□□□ 0.5
ARHGEF9O43307 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 RNA5SP413-201ENST00000516373 109 ntBASIC18.16■□□□□ 0.5
ARHGEF9O43307 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF9O43307 AC010536.3-201ENST00000620306 533 ntBASIC18.16■□□□□ 0.5
ARHGEF9O43307 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF9O43307 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF9O43307 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF9O43307 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF9O43307 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF9O43307 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF9O43307 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.16■□□□□ 0.5
ARHGEF9O43307 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF9O43307 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ARHGEF9O43307 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF9O43307 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF9O43307 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF9O43307 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF9O43307 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.15■□□□□ 0.5
ARHGEF9O43307 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF9O43307 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF9O43307 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ARHGEF9O43307 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.15■□□□□ 0.5
ARHGEF9O43307 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.15■□□□□ 0.5
ARHGEF9O43307 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF9O43307 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ARHGEF9O43307 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ARHGEF9O43307 PKD1P1-201ENST00000458669 6805 ntBASIC18.15■□□□□ 0.5
ARHGEF9O43307 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ARHGEF9O43307 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF9O43307 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF9O43307 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ARHGEF9O43307 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF9O43307 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.15■□□□□ 0.5
ARHGEF9O43307 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ARHGEF9O43307 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.15■□□□□ 0.5
ARHGEF9O43307 KRT8P36-201ENST00000489121 1440 ntBASIC18.15■□□□□ 0.5
ARHGEF9O43307 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.14■□□□□ 0.5
ARHGEF9O43307 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
ARHGEF9O43307 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ARHGEF9O43307 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
ARHGEF9O43307 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
ARHGEF9O43307 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
ARHGEF9O43307 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF9O43307 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF9O43307 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.14■□□□□ 0.49
ARHGEF9O43307 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.14■□□□□ 0.49
ARHGEF9O43307 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF9O43307 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF9O43307 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF9O43307 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms