Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.78■□□□□ 0.6
RTCAO00442 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RTCAO00442 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RTCAO00442 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.78■□□□□ 0.6
RTCAO00442 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.77■□□□□ 0.6
RTCAO00442 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.77■□□□□ 0.6
RTCAO00442 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RTCAO00442 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.77■□□□□ 0.6
RTCAO00442 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTCAO00442 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RTCAO00442 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTCAO00442 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RTCAO00442 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTCAO00442 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTCAO00442 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.77■□□□□ 0.6
RTCAO00442 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
RTCAO00442 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTCAO00442 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.77■□□□□ 0.6
RTCAO00442 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.77■□□□□ 0.6
RTCAO00442 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.77■□□□□ 0.6
RTCAO00442 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.77■□□□□ 0.6
RTCAO00442 AC008403.3-201ENST00000598924 454 ntBASIC18.77■□□□□ 0.6
RTCAO00442 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.77■□□□□ 0.6
RTCAO00442 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTCAO00442 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTCAO00442 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
RTCAO00442 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RTCAO00442 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RTCAO00442 TFP1-202ENST00000475455 1573 ntBASIC18.76■□□□□ 0.59
RTCAO00442 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.76■□□□□ 0.59
RTCAO00442 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RTCAO00442 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTCAO00442 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTCAO00442 TREX1-205ENST00000625293 1783 ntBASIC18.76■□□□□ 0.59
RTCAO00442 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTCAO00442 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.76■□□□□ 0.59
RTCAO00442 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RTCAO00442 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTCAO00442 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTCAO00442 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTCAO00442 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTCAO00442 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RTCAO00442 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RTCAO00442 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.76■□□□□ 0.59
RTCAO00442 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.76■□□□□ 0.59
RTCAO00442 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RTCAO00442 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTCAO00442 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTCAO00442 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
RTCAO00442 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTCAO00442 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.76■□□□□ 0.59
RTCAO00442 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.76■□□□□ 0.59
RTCAO00442 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTCAO00442 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTCAO00442 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTCAO00442 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTCAO00442 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RTCAO00442 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTCAO00442 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTCAO00442 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.75■□□□□ 0.59
RTCAO00442 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTCAO00442 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.75■□□□□ 0.59
RTCAO00442 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.75■□□□□ 0.59
RTCAO00442 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTCAO00442 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.75■□□□□ 0.59
RTCAO00442 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RTCAO00442 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTCAO00442 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RTCAO00442 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTCAO00442 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTCAO00442 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTCAO00442 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTCAO00442 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTCAO00442 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTCAO00442 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
RTCAO00442 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.74■□□□□ 0.59
RTCAO00442 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.74■□□□□ 0.59
RTCAO00442 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RTCAO00442 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RTCAO00442 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RTCAO00442 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
RTCAO00442 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.74■□□□□ 0.59
RTCAO00442 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 AP003097.1-201ENST00000530657 1135 ntBASIC18.74■□□□□ 0.59
RTCAO00442 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RTCAO00442 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RTCAO00442 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms