Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.3■□□□□ 0.68
CDC7O00311 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.3■□□□□ 0.68
CDC7O00311 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.3■□□□□ 0.68
CDC7O00311 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.3■□□□□ 0.68
CDC7O00311 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.3■□□□□ 0.68
CDC7O00311 AC083880.1-201ENST00000608266 535 ntBASIC19.3■□□□□ 0.68
CDC7O00311 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC7O00311 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC7O00311 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.3■□□□□ 0.68
CDC7O00311 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC7O00311 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.3■□□□□ 0.68
CDC7O00311 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC7O00311 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC7O00311 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.3■□□□□ 0.68
CDC7O00311 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDC7O00311 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.29■□□□□ 0.68
CDC7O00311 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC7O00311 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC7O00311 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDC7O00311 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.29■□□□□ 0.68
CDC7O00311 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC7O00311 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDC7O00311 AC087289.5-201ENST00000586076 3175 ntBASIC19.29■□□□□ 0.68
CDC7O00311 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.29■□□□□ 0.68
CDC7O00311 TFP1-202ENST00000475455 1573 ntBASIC19.29■□□□□ 0.68
CDC7O00311 AC092368.3-202ENST00000574180 1591 ntBASIC19.29■□□□□ 0.68
CDC7O00311 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.29■□□□□ 0.68
CDC7O00311 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.29■□□□□ 0.68
CDC7O00311 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CDC7O00311 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.29■□□□□ 0.68
CDC7O00311 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC7O00311 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC7O00311 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CDC7O00311 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDC7O00311 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.28■□□□□ 0.68
CDC7O00311 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC7O00311 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC7O00311 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDC7O00311 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC7O00311 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC7O00311 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC7O00311 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.28■□□□□ 0.68
CDC7O00311 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.28■□□□□ 0.68
CDC7O00311 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.28■□□□□ 0.68
CDC7O00311 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDC7O00311 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.28■□□□□ 0.68
CDC7O00311 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDC7O00311 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.28■□□□□ 0.68
CDC7O00311 AC104771.1-201ENST00000603335 964 ntBASIC19.28■□□□□ 0.68
CDC7O00311 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC7O00311 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CDC7O00311 Z82202.1-201ENST00000623446 1880 ntBASIC19.28■□□□□ 0.68
CDC7O00311 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC7O00311 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CDC7O00311 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.27■□□□□ 0.68
CDC7O00311 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.27■□□□□ 0.68
CDC7O00311 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.27■□□□□ 0.68
CDC7O00311 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDC7O00311 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC7O00311 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC7O00311 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC7O00311 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CDC7O00311 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC7O00311 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC7O00311 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDC7O00311 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.27■□□□□ 0.68
CDC7O00311 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.27■□□□□ 0.68
CDC7O00311 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDC7O00311 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDC7O00311 RPS2P52-201ENST00000469610 820 ntBASIC19.27■□□□□ 0.68
CDC7O00311 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC7O00311 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CDC7O00311 HLA-B-256ENST00000639848 1089 ntBASIC19.27■□□□□ 0.68
CDC7O00311 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC7O00311 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.27■□□□□ 0.68
CDC7O00311 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDC7O00311 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC7O00311 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC7O00311 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.27■□□□□ 0.68
CDC7O00311 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDC7O00311 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDC7O00311 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDC7O00311 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDC7O00311 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.27■□□□□ 0.67
CDC7O00311 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC7O00311 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC7O00311 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC7O00311 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC7O00311 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC7O00311 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC7O00311 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC7O00311 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC7O00311 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.26■□□□□ 0.67
CDC7O00311 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC7O00311 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.26■□□□□ 0.67
CDC7O00311 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC7O00311 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDC7O00311 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.26■□□□□ 0.67
CDC7O00311 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.26■□□□□ 0.67
CDC7O00311 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms