Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 MAPK10-287ENST00000641217 3037 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AL121950.1-201ENST00000624993 2077 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 API5P1-201ENST00000424316 1510 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AP002370.1-201ENST00000528055 1602 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 RNU1-55P-201ENST00000365510 158 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 MRPS6P2-201ENST00000381143 370 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 U6.112-201ENST00000384129 70 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 RNU6-729P-201ENST00000384399 107 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 MIR142-201ENST00000384835 87 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AF228730.1-201ENST00000397972 663 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AP000357.1-201ENST00000409926 1165 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 RNA5SP198-201ENST00000410376 127 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 HIGD1AP15-201ENST00000416198 280 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 OSTCP5-201ENST00000425293 453 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 MTND1P26-201ENST00000440488 538 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 GTF2IP12-201ENST00000456547 356 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AL139824.2-201ENST00000458731 1095 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 RPL5P12-201ENST00000477071 851 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AC093719.1-201ENST00000480427 441 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 RPS3AP15-201ENST00000483874 781 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AC117395.1-201ENST00000487390 403 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AC005412.2-201ENST00000492004 341 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 RN7SL362P-201ENST00000494228 267 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 RPL21P131-201ENST00000497298 483 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 H3F3AP3-201ENST00000497682 407 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AC105233.1-201ENST00000498840 781 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 OR52H2P-201ENST00000514607 902 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 OR52K3P-201ENST00000531655 943 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 RN7SL270P-201ENST00000579643 281 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AC245052.7-201ENST00000601161 359 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AC234772.3-201ENST00000602277 528 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AC087683.2-201ENST00000611384 326 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 AP004607.9-201ENST00000618202 316 ntBASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
PCDHGA6Q9Y5G7 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 AC233289.1-201ENST00000403700 508 ntBASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 AC096537.2-201ENST00000413707 714 ntBASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 AL592310.1-201ENST00000414330 671 ntBASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 USP9YP21-201ENST00000420603 432 ntBASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 XKRYP1-201ENST00000423438 492 ntBASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 AC099782.1-201ENST00000425889 474 ntBASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 XKRYP2-201ENST00000432915 492 ntBASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 AC000041.1-201ENST00000439655 175 ntBASIC6.29□□□□□ -1.4
PCDHGA6Q9Y5G7 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms