Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC018710.1-201ENST00000506509 158 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 RN7SKP242-201ENST00000515967 289 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 RNU6-1004P-201ENST00000516584 111 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 TBCA-203ENST00000517679 545 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 OR4A45P-201ENST00000529954 901 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC022832.1-201ENST00000530718 645 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 EGLN3P1-201ENST00000541727 720 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC092868.1-201ENST00000557949 802 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 MIR4637-201ENST00000582405 84 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 KPNA2P3-201ENST00000584190 848 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 BNIP3P8-201ENST00000597863 560 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AL139286.1-201ENST00000604465 483 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AL162730.1-201ENST00000605734 292 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 MIR1302-2-201ENST00000607096 138 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC135507.2-201ENST00000612443 309 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 TNFSF15-201ENST00000374044 2789 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC023818.2-201ENST00000623817 2304 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 DCAF13P1-201ENST00000495256 1330 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AL359091.1-201ENST00000449048 1734 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 RNU6-1300P-201ENST00000391046 108 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AL590004.1-201ENST00000405321 300 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AL512422.1-201ENST00000407033 553 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AL590806.1-201ENST00000415818 853 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AL009174.1-201ENST00000426577 416 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 RPSAP40-201ENST00000442343 891 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 HIST1H2APS6-201ENST00000448609 364 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 OR6K1P-201ENST00000456766 971 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 NIPA2P2-201ENST00000496376 1083 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 NDUFB4P2-201ENST00000509515 391 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms