Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 SERPINE2-203ENST00000409840 2569 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 HM13-224ENST00000498035 3932 ntTSL 2 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 ERCC6-202ENST00000374127 1782 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 TRIM43-201ENST00000272395 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AL359854.1-201ENST00000614203 1594 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 ADAMTS9-AS1-206ENST00000493124 1511 ntTSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC012467.2-201ENST00000607783 2583 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 LRRC37A6P-202ENST00000448648 5444 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 IKZF3-205ENST00000350532 1413 ntTSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 MR1-205ENST00000434571 7479 ntTSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC068733.1-202ENST00000531479 2456 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 RNU6-1188P-201ENST00000363795 107 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 RNU6-452P-201ENST00000384406 107 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 TNNT3-209ENST00000397304 720 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 MIR1296-201ENST00000408136 92 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 MIR548K-201ENST00000408406 116 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 RNU4-26P-201ENST00000410270 107 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC064862.3-201ENST00000411435 571 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 HSPE1P16-201ENST00000426640 348 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 TNNT3-210ENST00000446240 720 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 TVP23CP1-201ENST00000450317 639 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 NDUFB11P1-201ENST00000455818 465 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 RPL22P13-201ENST00000493291 347 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC010350.1-201ENST00000504908 231 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 FABP5P7-201ENST00000524732 405 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC087639.1-201ENST00000560974 920 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC027796.1-201ENST00000575593 512 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 MIR5008-201ENST00000584300 94 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 GMFG-204ENST00000595636 487 ntTSL 2 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC104695.2-201ENST00000605056 775 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AC018889.1-201ENST00000605372 397 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 RNU6-89P-201ENST00000606519 100 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 TNNT3-218ENST00000641787 924 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 Z97200.1-201ENST00000606154 2045 ntBASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 VPS11-206ENST00000614944 3388 ntTSL 2 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
PCDHB13Q9Y5F0 AP004289.2-201ENST00000444413 1457 ntBASIC9.4□□□□□ -0.9
PCDHB13Q9Y5F0 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
PCDHB13Q9Y5F0 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms