Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PCDHGB4Q9UN71 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 MTCO1P15-201ENST00000529569 1526 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AL161756.3-201ENST00000641216 2071 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 RNU4-39P-201ENST00000362455 127 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 MIR421-201ENST00000365696 85 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 U3.23-201ENST00000391132 200 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 RPS7P8-201ENST00000418311 581 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 NENFP1-201ENST00000419476 466 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 KRT8P51-201ENST00000438938 274 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 CXCR2P1-202ENST00000443392 1074 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 RPS18P1-201ENST00000447840 458 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC108751.3-201ENST00000461814 1020 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 RPL23AP40-201ENST00000487630 390 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 ASNSP4-201ENST00000511103 447 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 RN7SL66P-201ENST00000582099 264 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 MTCO2P22-201ENST00000603246 681 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC141002.1-201ENST00000607025 279 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC068726.1-201ENST00000610993 341 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 AC024587.1-201ENST00000505925 2157 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 KARSP1-201ENST00000451871 1752 ntBASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGB4Q9UN71 VPS35P1-201ENST00000563400 1518 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 DPPA2P2-201ENST00000418220 897 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 BX276092.6-201ENST00000430476 250 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 MTCYBP29-201ENST00000436327 1006 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 OR3D1P-201ENST00000438288 955 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AL645936.1-201ENST00000441979 518 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AL356121.1-201ENST00000442911 156 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 HIGD1AP16-201ENST00000450986 258 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AC069277.2-201ENST00000454211 432 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 SEPT7P3-201ENST00000455017 621 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 BX276092.8-201ENST00000455722 250 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 FABP5P6-201ENST00000510588 409 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AC026782.2-201ENST00000510845 636 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AC090958.1-201ENST00000511122 351 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 TOMM22P4-201ENST00000511318 336 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AC097486.1-201ENST00000515331 210 ntBASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGB4Q9UN71 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms