Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 PWAR1-201ENST00000624188 2414 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AL034546.1-201ENST00000623740 3693 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 RNA5SP30-201ENST00000365552 115 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 RPL11P3-201ENST00000395256 523 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 SNORA11B-201ENST00000408175 129 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 RN7SKP240-201ENST00000410583 375 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 RPSAP35-201ENST00000413753 818 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AL596266.1-201ENST00000448132 400 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AZGP1P2-201ENST00000454506 345 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 MRE11P1-201ENST00000464884 2127 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 RPS23P6-201ENST00000466136 431 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AL122020.1-201ENST00000472287 459 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 RN7SL570P-201ENST00000484405 292 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AC025458.1-201ENST00000506046 166 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 DUTP7-201ENST00000507982 486 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AC114781.3-201ENST00000512083 142 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AC027369.2-201ENST00000528030 440 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AC130364.2-201ENST00000528639 604 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AP000648.1-201ENST00000529682 397 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AC023389.2-201ENST00000580031 955 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AL031601.1-201ENST00000605702 394 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AP000550.3-201ENST00000637734 379 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AP001153.1-201ENST00000641024 338 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AC119674.1-217ENST00000641942 1086 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 AL442128.2-201ENST00000620246 1824 ntBASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO3Q9BXY4 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
RSPO3Q9BXY4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.21□□□□□ -1.57
RSPO3Q9BXY4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 RN7SKP186-201ENST00000365371 303 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 OR7E156P-201ENST00000400303 464 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 AC017078.1-201ENST00000416146 368 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 AL354766.1-201ENST00000423396 542 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 NPM1P18-201ENST00000434232 732 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 AC110602.1-201ENST00000437414 318 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 AC009963.3-201ENST00000458090 486 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 AC068228.1-201ENST00000461723 211 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 UBFD1P1-201ENST00000473259 814 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 AC111000.6-201ENST00000514471 709 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 SETP21-201ENST00000514799 892 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 SCARNA6.1-201ENST00000516989 238 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 WBP1LP3-201ENST00000523033 208 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 AC122688.1-201ENST00000541494 223 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 NPM1P5-201ENST00000557228 838 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 MIR4433B-201ENST00000581329 102 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 AC007448.1-201ENST00000582714 234 ntBASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
RSPO3Q9BXY4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms