Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RBMS2P1-201ENST00000525031 1226 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 GTF2IP11-201ENST00000526931 420 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC4.17□□□□□ -1.74
LITAFQ99732 AC079064.1-201ENST00000528365 362 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.17□□□□□ -1.74
LITAFQ99732 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC4.17□□□□□ -1.74
LITAFQ99732 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.17□□□□□ -1.74
LITAFQ99732 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.17□□□□□ -1.74
LITAFQ99732 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LITAFQ99732 AP002383.5-201ENST00000542623 1161 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 AL049830.4-201ENST00000555149 351 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
LITAFQ99732 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC4.17□□□□□ -1.74
LITAFQ99732 AC009962.1-201ENST00000567327 3813 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.17□□□□□ -1.74
LITAFQ99732 MIR4789-201ENST00000577469 82 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 RN7SL208P-201ENST00000577964 296 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC4.17□□□□□ -1.74
LITAFQ99732 RN7SL622P-201ENST00000585292 275 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.17□□□□□ -1.74
LITAFQ99732 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.17□□□□□ -1.74
LITAFQ99732 AC020916.2-201ENST00000591242 360 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 AC025588.2-201ENST00000604851 466 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 AC107952.2-201ENST00000606048 486 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.17□□□□□ -1.74
LITAFQ99732 AC091304.6-201ENST00000619761 202 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 AC105105.5-201ENST00000622635 1294 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 AC009120.7-201ENST00000623452 780 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC4.17□□□□□ -1.74
LITAFQ99732 AC068137.4-201ENST00000638485 296 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
LITAFQ99732 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LITAFQ99732 OR8G3P-202ENST00000641572 1255 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LITAFQ99732 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LITAFQ99732 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
LITAFQ99732 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LITAFQ99732 AL136984.1-201ENST00000607611 1893 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
LITAFQ99732 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LITAFQ99732 HSP90AA2P-201ENST00000530115 2196 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
LITAFQ99732 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LITAFQ99732 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.17□□□□□ -1.74
LITAFQ99732 NAMPTP1-201ENST00000440465 2514 ntBASIC4.17□□□□□ -1.74
LITAFQ99732 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.17□□□□□ -1.74
LITAFQ99732 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
LITAFQ99732 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
LITAFQ99732 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.16□□□□□ -1.74
LITAFQ99732 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.16□□□□□ -1.74
LITAFQ99732 AL132640.2-201ENST00000559968 1698 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.16□□□□□ -1.74
LITAFQ99732 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
LITAFQ99732 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.16□□□□□ -1.74
LITAFQ99732 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
LITAFQ99732 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 EEF1A1P28-201ENST00000450915 1403 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.16□□□□□ -1.74
LITAFQ99732 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC4.16□□□□□ -1.74
LITAFQ99732 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
LITAFQ99732 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC4.16□□□□□ -1.74
LITAFQ99732 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
LITAFQ99732 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LITAFQ99732 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LITAFQ99732 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LITAFQ99732 VTRNA3-1P-201ENST00000362552 102 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 RNA5SP114-201ENST00000363780 113 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 RN7SKP81-201ENST00000365603 331 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.16□□□□□ -1.74
LITAFQ99732 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
LITAFQ99732 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 FDPSP5-201ENST00000399474 1057 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 AL445238.1-204ENST00000400311 463 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC4.16□□□□□ -1.74
LITAFQ99732 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LITAFQ99732 RNA5SP280-201ENST00000411230 115 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC4.16□□□□□ -1.74
LITAFQ99732 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.16□□□□□ -1.74
LITAFQ99732 Z93930.2-202ENST00000418292 208 ntTSL 3 BASIC4.16□□□□□ -1.74
LITAFQ99732 CDKN2AIPNLP3-201ENST00000418361 309 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 HIGD1AP4-201ENST00000430194 280 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 NPM1P18-201ENST00000434232 732 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.16□□□□□ -1.74
LITAFQ99732 MTND2P40-201ENST00000436718 841 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.16□□□□□ -1.74
LITAFQ99732 AL138787.1-202ENST00000437804 898 ntBASIC4.16□□□□□ -1.74
LITAFQ99732 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.16□□□□□ -1.74
LITAFQ99732 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms