Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 AL158152.1-201ENST00000602652 1435 ntBASIC8.09□□□□□ -1.11
SIN3AQ96ST3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
SIN3AQ96ST3 AL353796.1-201ENST00000561542 3241 ntBASIC8.08□□□□□ -1.12
SIN3AQ96ST3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AC025470.1-201ENST00000510053 2032 ntBASIC8.08□□□□□ -1.12
SIN3AQ96ST3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 RPL11P3-201ENST00000395256 523 ntBASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AL450996.1-201ENST00000445574 1202 ntBASIC8.08□□□□□ -1.12
SIN3AQ96ST3 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 TMEM97P2-201ENST00000517841 403 ntBASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AC122688.1-201ENST00000541494 223 ntBASIC8.08□□□□□ -1.12
SIN3AQ96ST3 IGBP1P1-201ENST00000554337 1009 ntBASIC8.08□□□□□ -1.12
SIN3AQ96ST3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AP005403.1-201ENST00000579720 229 ntBASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AL118522.2-201ENST00000616045 615 ntBASIC8.08□□□□□ -1.12
SIN3AQ96ST3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AC021422.1-201ENST00000621212 473 ntBASIC8.08□□□□□ -1.12
SIN3AQ96ST3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AL669831.5-218ENST00000591702 1873 ntBASIC8.08□□□□□ -1.12
SIN3AQ96ST3 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SIN3AQ96ST3 AC092646.2-201ENST00000431242 2095 ntBASIC8.07□□□□□ -1.12
SIN3AQ96ST3 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 RN7SKP28-201ENST00000364770 305 ntBASIC8.07□□□□□ -1.12
SIN3AQ96ST3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 TNPO1P1-201ENST00000423641 1138 ntBASIC8.07□□□□□ -1.12
SIN3AQ96ST3 TMEM183AP1-205ENST00000432739 290 ntBASIC8.07□□□□□ -1.12
SIN3AQ96ST3 LDHAP2-201ENST00000437325 985 ntBASIC8.07□□□□□ -1.12
SIN3AQ96ST3 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.07□□□□□ -1.12
SIN3AQ96ST3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 RNA5SP362-201ENST00000516048 118 ntBASIC8.07□□□□□ -1.12
SIN3AQ96ST3 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 AC012146.2-201ENST00000576545 416 ntBASIC8.07□□□□□ -1.12
SIN3AQ96ST3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 OR7A1P-201ENST00000601206 970 ntBASIC8.07□□□□□ -1.12
SIN3AQ96ST3 AP000769.2-201ENST00000602344 396 ntBASIC8.07□□□□□ -1.12
SIN3AQ96ST3 PPATP2-201ENST00000605635 508 ntBASIC8.07□□□□□ -1.12
SIN3AQ96ST3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC8.07□□□□□ -1.12
SIN3AQ96ST3 AL357153.4-201ENST00000620487 1016 ntBASIC8.07□□□□□ -1.12
SIN3AQ96ST3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.07□□□□□ -1.12
SIN3AQ96ST3 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 BRAFP1-201ENST00000445336 2703 ntBASIC8.06□□□□□ -1.12
SIN3AQ96ST3 OR4F13P-202ENST00000560066 2054 ntBASIC8.06□□□□□ -1.12
SIN3AQ96ST3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 RN7SKP269-201ENST00000365545 319 ntBASIC8.06□□□□□ -1.12
SIN3AQ96ST3 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 SDHDP6-201ENST00000414693 480 ntBASIC8.06□□□□□ -1.12
SIN3AQ96ST3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 AC073072.2-201ENST00000447425 348 ntBASIC8.06□□□□□ -1.12
SIN3AQ96ST3 AL035090.1-201ENST00000454835 332 ntBASIC8.06□□□□□ -1.12
SIN3AQ96ST3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 RN7SL174P-201ENST00000475578 289 ntBASIC8.06□□□□□ -1.12
SIN3AQ96ST3 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 AC025857.2-201ENST00000602711 238 ntBASIC8.06□□□□□ -1.12
SIN3AQ96ST3 IGLCOR22-2-201ENST00000605398 313 ntBASIC8.06□□□□□ -1.12
SIN3AQ96ST3 AL352984.2-201ENST00000611153 546 ntBASIC8.06□□□□□ -1.12
SIN3AQ96ST3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 AC132068.1-201ENST00000623805 459 ntBASIC8.06□□□□□ -1.12
SIN3AQ96ST3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms