Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNGAP1Q96PV0 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.61□□□□□ -1.19
SYNGAP1Q96PV0 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNGAP1Q96PV0 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNGAP1Q96PV0 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNGAP1Q96PV0 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNGAP1Q96PV0 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SYNGAP1Q96PV0 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNGAP1Q96PV0 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SYNGAP1Q96PV0 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AL133243.4-201ENST00000623116 3109 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC092821.3-202ENST00000641304 2767 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 API5P1-201ENST00000424316 1510 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC104446.1-201ENST00000613728 1321 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 RNA5SP485-201ENST00000365053 119 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 MRPS6P2-201ENST00000381143 370 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 ST13P16-201ENST00000401760 781 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 RNA5SP431-201ENST00000410312 120 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 C8orf59P1-201ENST00000429930 303 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AL031667.1-201ENST00000440222 725 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 EEF1A1P39-201ENST00000440791 250 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 GAPDHP33-201ENST00000443168 1013 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AL360221.1-201ENST00000445989 335 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 RN7SL834P-201ENST00000461450 286 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC021220.1-201ENST00000507445 630 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 FABP5P12-201ENST00000515543 389 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC135983.3-201ENST00000528049 1226 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC084121.1-201ENST00000533882 835 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 FXNP1-201ENST00000555153 337 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC092718.4-201ENST00000566639 716 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 SYPL1P2-201ENST00000582878 727 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC087575.1-201ENST00000585087 229 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 BNIP3P30-201ENST00000601184 574 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC013244.1-201ENST00000604279 193 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC124312.4-201ENST00000605533 310 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 SNORD96A-201ENST00000606577 79 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC093635.1-201ENST00000609028 555 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AL354976.1-201ENST00000613843 387 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 MIR6721-201ENST00000617181 87 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC067852.7-201ENST00000623270 535 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AP003072.4-201ENST00000624580 310 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AP001052.1-201ENST00000626421 99 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC139713.2-210ENST00000641741 992 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 MAPK10-323ENST00000641493 3207 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC022819.1-201ENST00000563495 3910 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.6□□□□□ -1.19
SYNGAP1Q96PV0 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC013268.3-201ENST00000262716 2324 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms