Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 LRRC77P-213ENST00000637727 880 ntBASIC7.59□□□□□ -1.19
TRIM11Q96F44 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC7.59□□□□□ -1.19
TRIM11Q96F44 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM11Q96F44 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM11Q96F44 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM11Q96F44 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM11Q96F44 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
TRIM11Q96F44 NCOA4P3-201ENST00000513203 1877 ntBASIC7.59□□□□□ -1.19
TRIM11Q96F44 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.59□□□□□ -1.19
TRIM11Q96F44 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM11Q96F44 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM11Q96F44 AL133268.1-201ENST00000405676 1401 ntBASIC7.59□□□□□ -1.19
TRIM11Q96F44 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM11Q96F44 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.59□□□□□ -1.2
TRIM11Q96F44 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.2
TRIM11Q96F44 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
TRIM11Q96F44 AC092111.1-201ENST00000618256 3358 ntBASIC7.59□□□□□ -1.2
TRIM11Q96F44 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
TRIM11Q96F44 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.59□□□□□ -1.2
TRIM11Q96F44 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
TRIM11Q96F44 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC017002.4-201ENST00000604721 1525 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 RNA5SP396-201ENST00000364834 120 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 HIGD1AP12-201ENST00000427832 281 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC233982.1-201ENST00000451247 436 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 AURKAPS1-201ENST00000451805 1212 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 RN7SL228P-201ENST00000470060 303 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 PGBD4P1-201ENST00000473644 407 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 RPS14P8-201ENST00000478778 369 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 OR2A3P-201ENST00000493774 953 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC008628.2-201ENST00000502605 298 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 HIGD1AP18-201ENST00000520730 278 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC126177.6-201ENST00000550420 1009 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 NDUFA3P1-201ENST00000588007 252 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 AP001554.1-201ENST00000604533 376 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC097505.1-201ENST00000610199 565 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC009159.1-201ENST00000618386 642 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC078909.2-201ENST00000620584 398 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 KDM5DP1-201ENST00000622542 298 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC024614.3-201ENST00000637860 256 ntBASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM11Q96F44 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM11Q96F44 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM11Q96F44 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
TRIM11Q96F44 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM11Q96F44 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM11Q96F44 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM11Q96F44 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.57□□□□□ -1.2
TRIM11Q96F44 CBX3P1-201ENST00000325243 554 ntBASIC7.57□□□□□ -1.2
TRIM11Q96F44 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
TRIM11Q96F44 MIR128-2-201ENST00000384893 84 ntBASIC7.57□□□□□ -1.2
TRIM11Q96F44 RNU6-796P-201ENST00000391086 107 ntBASIC7.57□□□□□ -1.2
TRIM11Q96F44 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.57□□□□□ -1.2
TRIM11Q96F44 EEF1A1P40-201ENST00000412883 573 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms