Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
RTP4Q96DX8 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.94□□□□□ -1.46
RTP4Q96DX8 AC108673.3-201ENST00000609183 335 ntBASIC5.94□□□□□ -1.46
RTP4Q96DX8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RTP4Q96DX8 AL138960.2-201ENST00000625145 535 ntBASIC5.94□□□□□ -1.46
RTP4Q96DX8 MIR4302-201ENST00000638058 60 ntBASIC5.94□□□□□ -1.46
RTP4Q96DX8 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RTP4Q96DX8 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.94□□□□□ -1.46
RTP4Q96DX8 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RTP4Q96DX8 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RTP4Q96DX8 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
RTP4Q96DX8 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RTP4Q96DX8 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RTP4Q96DX8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RTP4Q96DX8 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RTP4Q96DX8 RNFT1P3-201ENST00000340898 1052 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AL031985.1-201ENST00000392713 418 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AL354890.1-201ENST00000413730 346 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 AL158827.1-201ENST00000416300 391 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC019205.1-201ENST00000421830 730 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 DEFA9P-201ENST00000433042 285 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC099670.2-201ENST00000435130 321 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 VN1R110P-201ENST00000438988 971 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AL391987.1-201ENST00000441025 200 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 CST12P-201ENST00000457644 362 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC128716.1-201ENST00000475129 166 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 GLUD1P3-202ENST00000508551 200 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC011411.1-201ENST00000509592 876 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 MTATP6P1-201ENST00000514057 681 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 RNA5SP271-201ENST00000516700 88 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 AP003396.4-201ENST00000527574 265 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC027243.2-201ENST00000602530 724 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC092474.3-201ENST00000603022 568 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC245014.3-201ENST00000618589 347 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AL391597.1-201ENST00000618707 694 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AL035661.1-201ENST00000620459 1144 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC005618.4-201ENST00000625053 554 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC027279.4-201ENST00000624371 2072 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RTP4Q96DX8 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RTP4Q96DX8 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC027088.4-201ENST00000611559 1947 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RTP4Q96DX8 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 AC114774.1-201ENST00000507410 1770 ntBASIC5.93□□□□□ -1.46
RTP4Q96DX8 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RTP4Q96DX8 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.92□□□□□ -1.46
RTP4Q96DX8 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RTP4Q96DX8 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RTP4Q96DX8 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RTP4Q96DX8 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RTP4Q96DX8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RTP4Q96DX8 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RTP4Q96DX8 RNA5SP453-201ENST00000362503 119 ntBASIC5.92□□□□□ -1.46
RTP4Q96DX8 RNA5SP477-201ENST00000362639 119 ntBASIC5.92□□□□□ -1.46
RTP4Q96DX8 RPL7P58-201ENST00000402913 758 ntBASIC5.92□□□□□ -1.46
RTP4Q96DX8 RN7SKP206-201ENST00000410823 293 ntBASIC5.92□□□□□ -1.46
RTP4Q96DX8 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.92□□□□□ -1.46
RTP4Q96DX8 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.92□□□□□ -1.46
RTP4Q96DX8 RPL23AP19-201ENST00000436229 369 ntBASIC5.92□□□□□ -1.46
RTP4Q96DX8 GAPDHP48-201ENST00000436626 961 ntBASIC5.92□□□□□ -1.46
RTP4Q96DX8 FCF1P7-201ENST00000451185 558 ntBASIC5.92□□□□□ -1.46
RTP4Q96DX8 AL513343.1-201ENST00000451818 792 ntBASIC5.92□□□□□ -1.46
RTP4Q96DX8 RPL5P12-201ENST00000477071 851 ntBASIC5.92□□□□□ -1.46
RTP4Q96DX8 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.92□□□□□ -1.46
RTP4Q96DX8 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RTP4Q96DX8 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.92□□□□□ -1.46
RTP4Q96DX8 GAPDHP62-201ENST00000515313 990 ntBASIC5.92□□□□□ -1.46
RTP4Q96DX8 AC021146.10-201ENST00000515628 706 ntBASIC5.92□□□□□ -1.46
RTP4Q96DX8 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.92□□□□□ -1.46
RTP4Q96DX8 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RTP4Q96DX8 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.92□□□□□ -1.46
RTP4Q96DX8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.92□□□□□ -1.46
RTP4Q96DX8 AC084824.2-201ENST00000548906 345 ntBASIC5.92□□□□□ -1.46
RTP4Q96DX8 AC068305.2-201ENST00000550567 1205 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms