Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7□□□□□ -1.29
ERCC4Q92889 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC7□□□□□ -1.29
ERCC4Q92889 VN1R87P-201ENST00000596706 487 ntBASIC7□□□□□ -1.29
ERCC4Q92889 AP001160.4-201ENST00000596971 382 ntBASIC7□□□□□ -1.29
ERCC4Q92889 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7□□□□□ -1.29
ERCC4Q92889 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC7□□□□□ -1.29
ERCC4Q92889 AC084782.3-201ENST00000612282 578 ntBASIC7□□□□□ -1.29
ERCC4Q92889 AC009159.2-201ENST00000617603 606 ntBASIC7□□□□□ -1.29
ERCC4Q92889 MIR7159-201ENST00000620587 66 ntBASIC7□□□□□ -1.29
ERCC4Q92889 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7□□□□□ -1.29
ERCC4Q92889 AC116667.2-201ENST00000641075 823 ntBASIC7□□□□□ -1.29
ERCC4Q92889 AC024587.1-201ENST00000505925 2157 ntBASIC7□□□□□ -1.29
ERCC4Q92889 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
ERCC4Q92889 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7□□□□□ -1.29
ERCC4Q92889 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7□□□□□ -1.29
ERCC4Q92889 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7□□□□□ -1.29
ERCC4Q92889 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
ERCC4Q92889 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7□□□□□ -1.29
ERCC4Q92889 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7□□□□□ -1.29
ERCC4Q92889 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7□□□□□ -1.29
ERCC4Q92889 MSL3P1-202ENST00000440028 1468 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
ERCC4Q92889 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
ERCC4Q92889 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.99□□□□□ -1.29
ERCC4Q92889 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC4Q92889 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC4Q92889 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.99□□□□□ -1.29
ERCC4Q92889 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
ERCC4Q92889 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.99□□□□□ -1.29
ERCC4Q92889 U3.23-201ENST00000391132 200 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.99□□□□□ -1.29
ERCC4Q92889 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 AC092651.1-201ENST00000426110 312 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 RNF19BPX-201ENST00000426224 625 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
ERCC4Q92889 AL512661.1-201ENST00000434586 1253 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 AC016908.1-201ENST00000442571 1219 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.99□□□□□ -1.29
ERCC4Q92889 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.99□□□□□ -1.29
ERCC4Q92889 AL096829.2-201ENST00000446582 742 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 RPL32P14-201ENST00000463196 378 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 AL355032.1-201ENST00000472981 438 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 RN7SL413P-201ENST00000482700 297 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.99□□□□□ -1.29
ERCC4Q92889 AP003066.2-201ENST00000529375 555 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.99□□□□□ -1.29
ERCC4Q92889 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.99□□□□□ -1.29
ERCC4Q92889 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC4Q92889 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.99□□□□□ -1.29
ERCC4Q92889 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.99□□□□□ -1.29
ERCC4Q92889 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC6.99□□□□□ -1.29
ERCC4Q92889 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.99□□□□□ -1.29
ERCC4Q92889 OOSP1P2-201ENST00000579644 351 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 AC005412.1-201ENST00000580812 1049 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 SYPL1P2-201ENST00000582878 727 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 GLYATL1P2-202ENST00000588046 902 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 AC020916.2-201ENST00000591242 360 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC4Q92889 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.99□□□□□ -1.29
ERCC4Q92889 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.99□□□□□ -1.29
ERCC4Q92889 AC103703.1-201ENST00000634783 663 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 OR7E91P-202ENST00000642062 1198 ntBASIC6.99□□□□□ -1.29
ERCC4Q92889 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
ERCC4Q92889 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.99□□□□□ -1.29
ERCC4Q92889 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.99□□□□□ -1.29
ERCC4Q92889 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
ERCC4Q92889 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
ERCC4Q92889 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC4Q92889 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC4Q92889 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC4Q92889 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.99□□□□□ -1.29
ERCC4Q92889 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.99□□□□□ -1.29
ERCC4Q92889 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.99□□□□□ -1.29
ERCC4Q92889 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC4Q92889 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
ERCC4Q92889 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC4Q92889 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
ERCC4Q92889 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC4Q92889 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC4Q92889 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC4Q92889 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC4Q92889 RN7SKP184-201ENST00000362348 333 ntBASIC6.98□□□□□ -1.29
ERCC4Q92889 SNORA43.1-201ENST00000364863 140 ntBASIC6.98□□□□□ -1.29
ERCC4Q92889 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
ERCC4Q92889 NPM1P37-201ENST00000403105 874 ntBASIC6.98□□□□□ -1.29
ERCC4Q92889 AL033519.1-201ENST00000407266 307 ntBASIC6.98□□□□□ -1.29
ERCC4Q92889 MIR1266-201ENST00000408125 84 ntBASIC6.98□□□□□ -1.29
ERCC4Q92889 RN7SKP151-201ENST00000410230 316 ntBASIC6.98□□□□□ -1.29
ERCC4Q92889 RN7SKP129-201ENST00000410288 299 ntBASIC6.98□□□□□ -1.29
ERCC4Q92889 UBTFL2-201ENST00000411859 1191 ntBASIC6.98□□□□□ -1.29
ERCC4Q92889 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.98□□□□□ -1.29
ERCC4Q92889 DHFRP2-201ENST00000414224 547 ntBASIC6.98□□□□□ -1.29
ERCC4Q92889 RPS26P38-201ENST00000414476 348 ntBASIC6.98□□□□□ -1.29
ERCC4Q92889 HYALP1-201ENST00000417674 1279 ntBASIC6.98□□□□□ -1.29
ERCC4Q92889 MTND2P16-201ENST00000419987 799 ntBASIC6.98□□□□□ -1.29
ERCC4Q92889 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC4Q92889 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.98□□□□□ -1.29
ERCC4Q92889 REREP1Y-201ENST00000422655 198 ntBASIC6.98□□□□□ -1.29
ERCC4Q92889 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms