Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC011891.2-201ENST00000604949 397 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC093388.1-201ENST00000609166 430 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 MIR6774-201ENST00000614651 70 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC096861.1-201ENST00000616652 240 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AL355974.3-201ENST00000617383 467 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC099654.8-201ENST00000637757 681 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 THAP12P9-201ENST00000503971 2360 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC009501.3-201ENST00000605001 1352 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 MSL3P1-202ENST00000440028 1468 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 RNU6-697P-201ENST00000363348 107 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 RNU6-1257P-201ENST00000384625 110 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 RPL7P58-201ENST00000402913 758 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AL133260.1-201ENST00000405720 405 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 TRIM60P17-201ENST00000415181 719 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 MTND2P2-201ENST00000434633 945 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 OSTCP1-201ENST00000455507 450 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 RNU6-334P-201ENST00000517072 102 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AC103833.1-201ENST00000517442 172 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 KCTD9P6-201ENST00000522306 950 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 OR56A7P-201ENST00000524865 941 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 MIR4420-201ENST00000583944 77 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 WBP1LP12-201ENST00000604449 331 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AC095038.2-201ENST00000621464 1070 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AC068880.4-201ENST00000623082 495 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 OR6C71P-202ENST00000641886 1107 ntBASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ATG4AQ8WYN0 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AL355834.1-201ENST00000556602 3965 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms