Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AL445222.1-201ENST00000607259 628 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AF129408.1-201ENST00000608767 431 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AL356752.1-201ENST00000615844 593 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AP003499.2-201ENST00000624100 483 ntBASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SMC1BQ8NDV3 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AC011416.1-201ENST00000514947 1732 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 MIR1204-201ENST00000408388 67 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 MTND4P24-201ENST00000424002 397 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 Z68868.1-201ENST00000429048 544 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 GEMIN2P1-201ENST00000454246 752 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 RN7SL808P-201ENST00000496066 299 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 RPEP1-201ENST00000504507 658 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 RN7SKP66-201ENST00000516681 231 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 GSTP1P1-201ENST00000548078 319 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AL356801.1-201ENST00000559320 294 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 RN7SL708P-201ENST00000580952 299 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AL133247.2-201ENST00000603236 482 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AC027449.1-201ENST00000608890 407 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AC022106.1-201ENST00000612834 766 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AC006927.4-201ENST00000639187 543 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 CASC19-264ENST00000641912 1184 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 CUL4AP1-201ENST00000514750 1863 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 CASC19-261ENST00000641853 1638 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 AC015871.3-201ENST00000618835 2261 ntBASIC7.38□□□□□ -1.23
SMC1BQ8NDV3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 RNU1-49P-201ENST00000363468 159 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 MRRF-207ENST00000373729 870 ntTSL 3 BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 MIR223-201ENST00000385204 110 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AL445466.1-201ENST00000448432 357 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AZGP1P2-201ENST00000454506 345 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC103563.5-201ENST00000455643 364 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC093890.1-201ENST00000502554 540 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC093801.2-201ENST00000503966 1050 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC112225.1-201ENST00000508230 297 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC010460.2-201ENST00000509054 677 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 HMGB1P47-201ENST00000511281 589 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 RNA5SP116-201ENST00000516132 98 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 RNU6-889P-201ENST00000517189 103 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC015802.2-201ENST00000589690 189 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms