Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 VN1R6P-201ENST00000458417 907 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC116353.1-201ENST00000489727 316 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC090071.1-201ENST00000507713 644 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC096754.1-201ENST00000508904 818 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC106774.2-201ENST00000510266 406 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 NUTF2P2-201ENST00000551207 384 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 MIR3159-201ENST00000584572 74 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 VN1R81P-201ENST00000602085 372 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AP001267.4-201ENST00000602598 545 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC139493.1-201ENST00000604368 397 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 CYCSP1-201ENST00000604815 315 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC019193.2-201ENST00000610012 634 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC079684.1-201ENST00000621405 437 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 MRRFP1-201ENST00000435941 1675 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 PABPC1P8-201ENST00000452851 2086 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AL137918.1-201ENST00000624542 1922 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 AC034229.2-201ENST00000566945 2508 ntBASIC7.72□□□□□ -1.17
FOXR1Q6PIV2 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
FOXR1Q6PIV2 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.71□□□□□ -1.17
FOXR1Q6PIV2 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.71□□□□□ -1.17
FOXR1Q6PIV2 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.71□□□□□ -1.17
FOXR1Q6PIV2 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
FOXR1Q6PIV2 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
FOXR1Q6PIV2 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
FOXR1Q6PIV2 AC079178.2-201ENST00000439323 1624 ntBASIC7.71□□□□□ -1.17
FOXR1Q6PIV2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC7.71□□□□□ -1.17
FOXR1Q6PIV2 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
FOXR1Q6PIV2 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
FOXR1Q6PIV2 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.17
FOXR1Q6PIV2 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 CYP2G2P-201ENST00000594920 1485 ntBASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 Y_RNA.356-201ENST00000365475 113 ntBASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 RPL21P108-201ENST00000413857 481 ntBASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC233728.2-201ENST00000425348 757 ntBASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 OR51B8P-201ENST00000449892 769 ntBASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 RNA5SP269-201ENST00000459032 137 ntBASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 RN7SL834P-201ENST00000461450 286 ntBASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 RPS6P25-201ENST00000464444 748 ntBASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC233724.1-201ENST00000503894 233 ntBASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 MTCO3P15-201ENST00000526563 574 ntBASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC103855.4-201ENST00000533158 265 ntBASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AL390816.3-201ENST00000604527 1066 ntBASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AL606760.4-201ENST00000617613 718 ntBASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.71□□□□□ -1.18
FOXR1Q6PIV2 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms