Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM71Q2Q1W2 AP000619.2-201ENST00000546014 969 ntBASIC6.59□□□□□ -1.35
TRIM71Q2Q1W2 AC119403.2-201ENST00000590960 598 ntBASIC6.59□□□□□ -1.35
TRIM71Q2Q1W2 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM71Q2Q1W2 AP000864.1-201ENST00000609424 650 ntBASIC6.59□□□□□ -1.35
TRIM71Q2Q1W2 AC119674.1-220ENST00000641502 1048 ntBASIC6.59□□□□□ -1.35
TRIM71Q2Q1W2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM71Q2Q1W2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM71Q2Q1W2 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM71Q2Q1W2 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
TRIM71Q2Q1W2 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.36
TRIM71Q2Q1W2 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 TNPO1P2-201ENST00000426249 2665 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 PARP4P1-201ENST00000435945 2337 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 RNU6-1331P-201ENST00000363658 106 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 HMGB1P20-201ENST00000402555 677 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AL512504.1-201ENST00000415494 778 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 BMS1P17-202ENST00000416720 316 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AL691517.1-201ENST00000440833 1235 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC073909.1-201ENST00000447112 999 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC083795.1-201ENST00000491760 320 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 RN7SL466P-201ENST00000497546 295 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC117525.1-201ENST00000515228 503 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 RNU6-760P-201ENST00000516078 97 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 HMGN2P36-201ENST00000529541 409 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC005000.1-201ENST00000536192 288 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC016180.1-201ENST00000567945 403 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 MIR4301-201ENST00000577203 66 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 ADAD1P2-201ENST00000588476 646 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC020916.2-201ENST00000591242 360 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC084036.1-201ENST00000609190 508 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AL031658.2-201ENST00000616850 651 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC009452.1-201ENST00000640823 606 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 AC092692.1-201ENST00000623625 2595 ntBASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.58□□□□□ -1.36
TRIM71Q2Q1W2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 AC096921.2-201ENST00000561507 1916 ntBASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 Y_RNA.110-201ENST00000363220 99 ntBASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 RNU6-152P-201ENST00000384037 107 ntBASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 NMD3P2-201ENST00000421815 761 ntBASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 AL445528.1-201ENST00000426330 420 ntBASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 RPS7P3-201ENST00000443360 580 ntBASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 AC138866.2-201ENST00000508650 584 ntBASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
TRIM71Q2Q1W2 SNORA26.10-201ENST00000516427 141 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms