Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.44□□□□□ -1.22
COL16A1Q07092 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL16A1Q07092 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL16A1Q07092 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL16A1Q07092 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL16A1Q07092 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
COL16A1Q07092 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL16A1Q07092 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.43□□□□□ -1.22
COL16A1Q07092 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
COL16A1Q07092 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.43□□□□□ -1.22
COL16A1Q07092 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.43□□□□□ -1.22
COL16A1Q07092 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
COL16A1Q07092 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.43□□□□□ -1.22
COL16A1Q07092 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
COL16A1Q07092 MIR640-201ENST00000385086 96 ntBASIC7.43□□□□□ -1.22
COL16A1Q07092 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 AC007161.1-204ENST00000423039 460 ntBASIC7.43□□□□□ -1.22
COL16A1Q07092 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 AC091180.1-201ENST00000462104 372 ntBASIC7.43□□□□□ -1.22
COL16A1Q07092 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.43□□□□□ -1.22
COL16A1Q07092 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 AC093824.1-201ENST00000508796 343 ntBASIC7.43□□□□□ -1.22
COL16A1Q07092 BTF3P13-201ENST00000513224 490 ntBASIC7.43□□□□□ -1.22
COL16A1Q07092 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC7.43□□□□□ -1.22
COL16A1Q07092 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.43□□□□□ -1.22
COL16A1Q07092 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC7.43□□□□□ -1.22
COL16A1Q07092 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC7.43□□□□□ -1.22
COL16A1Q07092 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.43□□□□□ -1.22
COL16A1Q07092 AC099654.6-201ENST00000636487 512 ntBASIC7.43□□□□□ -1.22
COL16A1Q07092 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
COL16A1Q07092 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.43□□□□□ -1.22
COL16A1Q07092 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
COL16A1Q07092 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
COL16A1Q07092 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.43□□□□□ -1.22
COL16A1Q07092 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.43□□□□□ -1.22
COL16A1Q07092 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 AL008638.3-201ENST00000623027 5182 ntBASIC7.43□□□□□ -1.22
COL16A1Q07092 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
COL16A1Q07092 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL16A1Q07092 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL16A1Q07092 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL16A1Q07092 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL16A1Q07092 RNA5SP332-201ENST00000391063 115 ntBASIC7.42□□□□□ -1.22
COL16A1Q07092 AC069213.2-201ENST00000420238 366 ntBASIC7.42□□□□□ -1.22
COL16A1Q07092 AC079922.1-201ENST00000443291 359 ntBASIC7.42□□□□□ -1.22
COL16A1Q07092 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
COL16A1Q07092 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC7.42□□□□□ -1.22
COL16A1Q07092 CSNK1A1P3-201ENST00000504105 330 ntBASIC7.42□□□□□ -1.22
COL16A1Q07092 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC7.42□□□□□ -1.22
COL16A1Q07092 CYP4F27P-201ENST00000514557 494 ntBASIC7.42□□□□□ -1.22
COL16A1Q07092 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.42□□□□□ -1.22
COL16A1Q07092 AC134349.2-201ENST00000535136 910 ntBASIC7.42□□□□□ -1.22
COL16A1Q07092 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC7.42□□□□□ -1.22
COL16A1Q07092 MIR8089-201ENST00000620165 82 ntBASIC7.42□□□□□ -1.22
COL16A1Q07092 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
COL16A1Q07092 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL16A1Q07092 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC7.42□□□□□ -1.22
COL16A1Q07092 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL16A1Q07092 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
COL16A1Q07092 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL16A1Q07092 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL16A1Q07092 AL391261.1-201ENST00000555712 1479 ntBASIC7.42□□□□□ -1.22
COL16A1Q07092 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL16A1Q07092 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL16A1Q07092 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
COL16A1Q07092 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL16A1Q07092 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL16A1Q07092 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL16A1Q07092 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
COL16A1Q07092 MFSD8-239ENST00000641590 2479 ntBASIC7.42□□□□□ -1.22
COL16A1Q07092 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
COL16A1Q07092 RNU1-146P-201ENST00000364015 165 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.41□□□□□ -1.22
COL16A1Q07092 GAPDHP25-201ENST00000447061 1001 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 AC026402.1-201ENST00000513642 170 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 RNA5SP373-201ENST00000517271 95 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 AP002981.1-201ENST00000517692 975 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.41□□□□□ -1.22
COL16A1Q07092 MIR4284-201ENST00000578924 81 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.41□□□□□ -1.22
COL16A1Q07092 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC7.41□□□□□ -1.22
COL16A1Q07092 BNIP3P22-201ENST00000593399 556 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC7.41□□□□□ -1.22
COL16A1Q07092 AC068724.3-201ENST00000625906 87 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 AC074101.1-201ENST00000637861 241 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
COL16A1Q07092 AC119674.1-213ENST00000641177 1386 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
COL16A1Q07092 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL16A1Q07092 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms