Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC027449.1-201ENST00000608890 407 ntBASIC5.55□□□□□ -1.52
LTBQ06643 AC004948.1-201ENST00000609858 672 ntBASIC5.55□□□□□ -1.52
LTBQ06643 SDR42E1P1-201ENST00000611327 477 ntBASIC5.55□□□□□ -1.52
LTBQ06643 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.55□□□□□ -1.52
LTBQ06643 AC073488.6-201ENST00000632293 754 ntBASIC5.55□□□□□ -1.52
LTBQ06643 MAPK10-350ENST00000641777 965 ntBASIC5.55□□□□□ -1.52
LTBQ06643 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LTBQ06643 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.55□□□□□ -1.52
LTBQ06643 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LTBQ06643 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
LTBQ06643 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LTBQ06643 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LTBQ06643 AC073429.2-201ENST00000569694 1444 ntBASIC5.55□□□□□ -1.52
LTBQ06643 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.55□□□□□ -1.52
LTBQ06643 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LTBQ06643 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LTBQ06643 OR4G1P-202ENST00000641173 1788 ntBASIC5.55□□□□□ -1.52
LTBQ06643 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LTBQ06643 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
LTBQ06643 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LTBQ06643 AC024651.2-201ENST00000562480 2098 ntBASIC5.54□□□□□ -1.52
LTBQ06643 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LTBQ06643 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LTBQ06643 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LTBQ06643 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LTBQ06643 GNG5P2-201ENST00000372054 207 ntBASIC5.54□□□□□ -1.52
LTBQ06643 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.54□□□□□ -1.52
LTBQ06643 AL121835.1-201ENST00000404250 354 ntBASIC5.54□□□□□ -1.52
LTBQ06643 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.54□□□□□ -1.52
LTBQ06643 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.54□□□□□ -1.52
LTBQ06643 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.54□□□□□ -1.52
LTBQ06643 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.54□□□□□ -1.52
LTBQ06643 AC016027.5-201ENST00000427227 210 ntBASIC5.54□□□□□ -1.52
LTBQ06643 Z85994.2-201ENST00000434327 452 ntBASIC5.54□□□□□ -1.52
LTBQ06643 PNKDP1-201ENST00000435914 430 ntBASIC5.54□□□□□ -1.52
LTBQ06643 AL512593.1-201ENST00000444758 779 ntBASIC5.54□□□□□ -1.52
LTBQ06643 AL590004.3-202ENST00000445883 451 ntBASIC5.54□□□□□ -1.52
LTBQ06643 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.54□□□□□ -1.52
LTBQ06643 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.54□□□□□ -1.52
LTBQ06643 RPL7L1P3-201ENST00000455249 689 ntBASIC5.54□□□□□ -1.52
LTBQ06643 AL445687.2-201ENST00000458156 728 ntBASIC5.54□□□□□ -1.52
LTBQ06643 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.54□□□□□ -1.52
LTBQ06643 AC007998.1-201ENST00000474156 672 ntBASIC5.54□□□□□ -1.52
LTBQ06643 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.54□□□□□ -1.52
LTBQ06643 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.54□□□□□ -1.52
LTBQ06643 LSM3P4-201ENST00000502948 309 ntBASIC5.54□□□□□ -1.52
LTBQ06643 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.54□□□□□ -1.52
LTBQ06643 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.54□□□□□ -1.52
LTBQ06643 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.54□□□□□ -1.52
LTBQ06643 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.54□□□□□ -1.52
LTBQ06643 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.54□□□□□ -1.52
LTBQ06643 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.54□□□□□ -1.52
LTBQ06643 CYP4F27P-201ENST00000514557 494 ntBASIC5.54□□□□□ -1.52
LTBQ06643 SNORD46.2-201ENST00000516021 102 ntBASIC5.54□□□□□ -1.52
LTBQ06643 RNA5SP434-201ENST00000516647 121 ntBASIC5.54□□□□□ -1.52
LTBQ06643 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.54□□□□□ -1.52
LTBQ06643 AC026407.1-201ENST00000518369 204 ntBASIC5.54□□□□□ -1.52
LTBQ06643 AC021733.2-201ENST00000518830 497 ntBASIC5.54□□□□□ -1.52
LTBQ06643 AP006245.2-201ENST00000522004 300 ntBASIC5.54□□□□□ -1.52
LTBQ06643 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.54□□□□□ -1.52
LTBQ06643 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.54□□□□□ -1.52
LTBQ06643 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LTBQ06643 HNRNPCP1-201ENST00000556181 766 ntBASIC5.54□□□□□ -1.52
LTBQ06643 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LTBQ06643 LINC00557-201ENST00000563184 1279 ntBASIC5.54□□□□□ -1.52
LTBQ06643 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.54□□□□□ -1.52
LTBQ06643 MIR4700-201ENST00000578311 74 ntBASIC5.54□□□□□ -1.52
LTBQ06643 AC004890.3-201ENST00000605566 1095 ntBASIC5.54□□□□□ -1.52
LTBQ06643 AC112503.2-201ENST00000609005 552 ntBASIC5.54□□□□□ -1.52
LTBQ06643 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.54□□□□□ -1.52
LTBQ06643 AL049777.1-201ENST00000622740 518 ntBASIC5.54□□□□□ -1.52
LTBQ06643 AP000770.2-201ENST00000623694 100 ntBASIC5.54□□□□□ -1.52
LTBQ06643 AC010872.1-201ENST00000624225 675 ntBASIC5.54□□□□□ -1.52
LTBQ06643 AC069542.2-201ENST00000624816 216 ntBASIC5.54□□□□□ -1.52
LTBQ06643 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.54□□□□□ -1.52
LTBQ06643 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.54□□□□□ -1.52
LTBQ06643 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.54□□□□□ -1.52
LTBQ06643 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LTBQ06643 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
LTBQ06643 AC123769.1-201ENST00000530992 3192 ntBASIC5.54□□□□□ -1.52
LTBQ06643 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LTBQ06643 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
LTBQ06643 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LTBQ06643 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.54□□□□□ -1.52
LTBQ06643 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.54□□□□□ -1.52
LTBQ06643 MTCO1P28-201ENST00000574177 1528 ntBASIC5.53□□□□□ -1.52
LTBQ06643 AP001002.1-201ENST00000625148 1513 ntBASIC5.53□□□□□ -1.52
LTBQ06643 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
LTBQ06643 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.53□□□□□ -1.52
LTBQ06643 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.53□□□□□ -1.52
LTBQ06643 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.53□□□□□ -1.52
LTBQ06643 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.53□□□□□ -1.52
LTBQ06643 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LTBQ06643 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LTBQ06643 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms