Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RIPK4P57078 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
RIPK4P57078 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RIPK4P57078 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.46□□□□□ -1.22
RIPK4P57078 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RIPK4P57078 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
RIPK4P57078 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RIPK4P57078 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RIPK4P57078 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RIPK4P57078 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RIPK4P57078 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
RIPK4P57078 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RIPK4P57078 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RIPK4P57078 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
RIPK4P57078 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RIPK4P57078 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.45□□□□□ -1.22
RIPK4P57078 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.45□□□□□ -1.22
RIPK4P57078 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
RIPK4P57078 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RIPK4P57078 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
RIPK4P57078 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.45□□□□□ -1.22
RIPK4P57078 AC113412.1-201ENST00000425840 504 ntBASIC7.45□□□□□ -1.22
RIPK4P57078 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.45□□□□□ -1.22
RIPK4P57078 RPL12P16-201ENST00000431098 498 ntBASIC7.45□□□□□ -1.22
RIPK4P57078 FMO7P-201ENST00000436045 768 ntBASIC7.45□□□□□ -1.22
RIPK4P57078 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.45□□□□□ -1.22
RIPK4P57078 AC073909.1-201ENST00000447112 999 ntBASIC7.45□□□□□ -1.22
RIPK4P57078 PPIAP20-201ENST00000449839 135 ntBASIC7.45□□□□□ -1.22
RIPK4P57078 AP000547.1-201ENST00000454360 617 ntBASIC7.45□□□□□ -1.22
RIPK4P57078 RPS7P6-201ENST00000485777 579 ntBASIC7.45□□□□□ -1.22
RIPK4P57078 DUTP7-201ENST00000507982 486 ntBASIC7.45□□□□□ -1.22
RIPK4P57078 AC139697.1-201ENST00000548429 745 ntBASIC7.45□□□□□ -1.22
RIPK4P57078 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.45□□□□□ -1.22
RIPK4P57078 AC022404.1-201ENST00000555320 273 ntBASIC7.45□□□□□ -1.22
RIPK4P57078 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.45□□□□□ -1.22
RIPK4P57078 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.45□□□□□ -1.22
RIPK4P57078 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
RIPK4P57078 AC011445.2-201ENST00000599274 173 ntBASIC7.45□□□□□ -1.22
RIPK4P57078 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
RIPK4P57078 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.45□□□□□ -1.22
RIPK4P57078 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
RIPK4P57078 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RIPK4P57078 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
RIPK4P57078 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.45□□□□□ -1.22
RIPK4P57078 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
RIPK4P57078 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
RIPK4P57078 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RIPK4P57078 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
RIPK4P57078 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7.45□□□□□ -1.22
RIPK4P57078 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RIPK4P57078 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RIPK4P57078 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.44□□□□□ -1.22
RIPK4P57078 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.44□□□□□ -1.22
RIPK4P57078 RN7SKP293-201ENST00000411389 296 ntBASIC7.44□□□□□ -1.22
RIPK4P57078 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RIPK4P57078 MEMO1P4-201ENST00000453590 386 ntBASIC7.44□□□□□ -1.22
RIPK4P57078 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.44□□□□□ -1.22
RIPK4P57078 AL049872.1-201ENST00000556323 322 ntBASIC7.44□□□□□ -1.22
RIPK4P57078 DHFRP1-201ENST00000579682 559 ntBASIC7.44□□□□□ -1.22
RIPK4P57078 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.44□□□□□ -1.22
RIPK4P57078 AC004477.3-201ENST00000614061 590 ntBASIC7.44□□□□□ -1.22
RIPK4P57078 PWAR1-201ENST00000624188 2414 ntBASIC7.44□□□□□ -1.22
RIPK4P57078 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RIPK4P57078 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RIPK4P57078 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
RIPK4P57078 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
RIPK4P57078 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RIPK4P57078 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
RIPK4P57078 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RIPK4P57078 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
RIPK4P57078 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RIPK4P57078 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RIPK4P57078 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.43□□□□□ -1.22
RIPK4P57078 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.43□□□□□ -1.22
RIPK4P57078 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.43□□□□□ -1.22
RIPK4P57078 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RIPK4P57078 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RIPK4P57078 RNU11-201ENST00000387069 134 ntBASIC7.43□□□□□ -1.22
RIPK4P57078 RN7SKP279-201ENST00000411383 298 ntBASIC7.43□□□□□ -1.22
RIPK4P57078 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.43□□□□□ -1.22
RIPK4P57078 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.43□□□□□ -1.22
RIPK4P57078 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.43□□□□□ -1.22
RIPK4P57078 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.43□□□□□ -1.22
RIPK4P57078 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.43□□□□□ -1.22
RIPK4P57078 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.43□□□□□ -1.22
RIPK4P57078 AL360012.1-201ENST00000602813 131 ntBASIC7.43□□□□□ -1.22
RIPK4P57078 AC104695.2-201ENST00000605056 775 ntBASIC7.43□□□□□ -1.22
RIPK4P57078 NANOGP3-201ENST00000605855 286 ntBASIC7.43□□□□□ -1.22
RIPK4P57078 FAM72A-208ENST00000607379 1139 ntBASIC7.43□□□□□ -1.22
RIPK4P57078 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RIPK4P57078 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RIPK4P57078 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RIPK4P57078 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RIPK4P57078 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.43□□□□□ -1.22
RIPK4P57078 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.43□□□□□ -1.22
RIPK4P57078 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.43□□□□□ -1.22
RIPK4P57078 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RIPK4P57078 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
RIPK4P57078 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RIPK4P57078 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms