Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RN7SKP151-201ENST00000410230 316 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 AC098592.2-201ENST00000413158 265 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 AL096829.1-201ENST00000413677 457 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 ARAFP1-201ENST00000422172 605 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 RPS6P14-201ENST00000425165 719 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 MTND4LP14-201ENST00000429447 288 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN20P56880 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN20P56880 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.5□□□□□ -1.53
CLDN20P56880 ZNF619P1-201ENST00000446539 752 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 MTND5P8-201ENST00000449817 1083 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN20P56880 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.5□□□□□ -1.53
CLDN20P56880 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN20P56880 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN20P56880 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.5□□□□□ -1.53
CLDN20P56880 SETP12-201ENST00000514068 805 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.5□□□□□ -1.53
CLDN20P56880 RN7SKP238-201ENST00000516483 249 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN20P56880 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.5□□□□□ -1.53
CLDN20P56880 AL136520.1-202ENST00000555494 763 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN20P56880 AC090826.1-203ENST00000569235 490 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 AC008507.3-201ENST00000585753 472 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN20P56880 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN20P56880 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN20P56880 AC040174.2-201ENST00000602701 465 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 AL391262.2-201ENST00000622466 494 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 AL138960.2-201ENST00000625145 535 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN20P56880 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN20P56880 AC116667.2-201ENST00000641075 823 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN20P56880 AL359091.1-201ENST00000449048 1734 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLDN20P56880 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN20P56880 RBMY1HP-201ENST00000382759 1389 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN20P56880 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN20P56880 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLDN20P56880 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN20P56880 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 ADAM24P-201ENST00000398655 2101 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN20P56880 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CLDN20P56880 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 AC137056.2-201ENST00000624055 1958 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 PSG10P-201ENST00000501199 1500 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN20P56880 MTCO1P28-201ENST00000574177 1528 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CLDN20P56880 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN20P56880 SNORD1C-201ENST00000363315 78 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AC004386.1-201ENST00000393214 761 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN20P56880 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN20P56880 AC002069.1-201ENST00000429649 1159 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN20P56880 RAB9AP5-201ENST00000437794 597 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 ATP5LP2-201ENST00000440646 311 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 RAB9AP2-201ENST00000443911 597 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 FTLP8-201ENST00000446770 267 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 PPIAP27-201ENST00000453800 265 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN20P56880 CYCSP53-201ENST00000455540 265 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AC112187.1-201ENST00000455837 479 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AC104849.1-201ENST00000462623 405 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AC023194.2-201ENST00000465398 406 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.49□□□□□ -1.53
CLDN20P56880 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.49□□□□□ -1.53
CLDN20P56880 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN20P56880 GTF2IP11-201ENST00000526931 420 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN20P56880 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN20P56880 AC079905.1-201ENST00000549280 475 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AC090888.3-201ENST00000558917 509 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms