Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC005261.6-201ENST00000623072 1387 ntBASIC5.57□□□□□ -1.52
PKNOX1P55347 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PKNOX1P55347 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PKNOX1P55347 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PKNOX1P55347 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PKNOX1P55347 AC026523.2-201ENST00000625039 7739 ntBASIC5.57□□□□□ -1.52
PKNOX1P55347 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PKNOX1P55347 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PKNOX1P55347 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PKNOX1P55347 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PKNOX1P55347 RN7SKP69-201ENST00000365390 305 ntBASIC5.57□□□□□ -1.52
PKNOX1P55347 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PKNOX1P55347 RN7SKP29-201ENST00000410957 272 ntBASIC5.57□□□□□ -1.52
PKNOX1P55347 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.57□□□□□ -1.52
PKNOX1P55347 AC079809.1-201ENST00000415468 276 ntBASIC5.57□□□□□ -1.52
PKNOX1P55347 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.57□□□□□ -1.52
PKNOX1P55347 CYCSP51-201ENST00000443545 318 ntBASIC5.57□□□□□ -1.52
PKNOX1P55347 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.57□□□□□ -1.52
PKNOX1P55347 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.57□□□□□ -1.52
PKNOX1P55347 AL122020.1-201ENST00000472287 459 ntBASIC5.57□□□□□ -1.52
PKNOX1P55347 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.57□□□□□ -1.52
PKNOX1P55347 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.57□□□□□ -1.52
PKNOX1P55347 AC139697.1-201ENST00000548429 745 ntBASIC5.57□□□□□ -1.52
PKNOX1P55347 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.57□□□□□ -1.52
PKNOX1P55347 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PKNOX1P55347 MIR4260-201ENST00000583107 67 ntBASIC5.57□□□□□ -1.52
PKNOX1P55347 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PKNOX1P55347 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PKNOX1P55347 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PKNOX1P55347 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PKNOX1P55347 AC007938.2-201ENST00000604666 2634 ntBASIC5.57□□□□□ -1.52
PKNOX1P55347 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.57□□□□□ -1.52
PKNOX1P55347 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 HSPD1P7-201ENST00000447985 1686 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 GVINP1-202ENST00000531871 7271 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PKNOX1P55347 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.56□□□□□ -1.52
PKNOX1P55347 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
PKNOX1P55347 RNFT1P3-201ENST00000340898 1052 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.56□□□□□ -1.52
PKNOX1P55347 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 MIR130A-201ENST00000385274 89 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.56□□□□□ -1.52
PKNOX1P55347 FAM183DP-201ENST00000421987 399 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.56□□□□□ -1.52
PKNOX1P55347 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 RPL5P25-201ENST00000441148 775 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.56□□□□□ -1.52
PKNOX1P55347 AC044810.1-201ENST00000480271 711 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 DUTP1-201ENST00000493631 470 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 RN7SL57P-201ENST00000493687 290 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 RPS17P5-201ENST00000498293 408 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 AC018797.1-201ENST00000510791 255 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 AC007956.1-201ENST00000555623 542 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 AC019322.1-201ENST00000571869 389 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 OR1E3-201ENST00000575608 948 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 MIR4502-201ENST00000580432 81 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.56□□□□□ -1.52
PKNOX1P55347 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.56□□□□□ -1.52
PKNOX1P55347 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.56□□□□□ -1.52
PKNOX1P55347 AC108673.3-201ENST00000609183 335 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.56□□□□□ -1.52
PKNOX1P55347 MIR6793-201ENST00000612376 63 ntBASIC5.56□□□□□ -1.52
PKNOX1P55347 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.56□□□□□ -1.52
PKNOX1P55347 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.56□□□□□ -1.52
PKNOX1P55347 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.56□□□□□ -1.52
PKNOX1P55347 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.56□□□□□ -1.52
PKNOX1P55347 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
PKNOX1P55347 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PKNOX1P55347 PDZK1P1-202ENST00000425209 1350 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.55□□□□□ -1.52
PKNOX1P55347 AF287957.1-201ENST00000607368 1595 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PKNOX1P55347 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.55□□□□□ -1.52
PKNOX1P55347 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.55□□□□□ -1.52
PKNOX1P55347 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PKNOX1P55347 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PKNOX1P55347 AL121886.1-201ENST00000358609 435 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PKNOX1P55347 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.55□□□□□ -1.52
PKNOX1P55347 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.55□□□□□ -1.52
PKNOX1P55347 AL133482.1-201ENST00000415988 498 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.55□□□□□ -1.52
PKNOX1P55347 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PKNOX1P55347 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.55□□□□□ -1.52
PKNOX1P55347 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.55□□□□□ -1.52
PKNOX1P55347 TMEM183AP1-205ENST00000432739 290 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms