Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH12P55289 WDR95P-201ENST00000425638 1542 ntBASIC5.56□□□□□ -1.52
CDH12P55289 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 LINC01613-201ENST00000561476 2780 ntBASIC5.56□□□□□ -1.52
CDH12P55289 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
CDH12P55289 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDH12P55289 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.56□□□□□ -1.52
CDH12P55289 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CDH12P55289 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH12P55289 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CDH12P55289 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CDH12P55289 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 CASC19-238ENST00000641523 1558 ntBASIC5.55□□□□□ -1.52
CDH12P55289 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH12P55289 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 OR10R3P-201ENST00000361688 942 ntBASIC5.55□□□□□ -1.52
CDH12P55289 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 PSMA6P1-201ENST00000400275 741 ntBASIC5.55□□□□□ -1.52
CDH12P55289 MYL6P5-201ENST00000412707 459 ntBASIC5.55□□□□□ -1.52
CDH12P55289 AC098592.2-201ENST00000413158 265 ntBASIC5.55□□□□□ -1.52
CDH12P55289 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH12P55289 VN1R31P-201ENST00000417498 730 ntBASIC5.55□□□□□ -1.52
CDH12P55289 AL121882.1-201ENST00000422893 417 ntBASIC5.55□□□□□ -1.52
CDH12P55289 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH12P55289 Z99127.2-201ENST00000441426 334 ntBASIC5.55□□□□□ -1.52
CDH12P55289 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH12P55289 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH12P55289 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH12P55289 RPL31P20-201ENST00000449593 360 ntBASIC5.55□□□□□ -1.52
CDH12P55289 AC099670.1-201ENST00000455141 783 ntBASIC5.55□□□□□ -1.52
CDH12P55289 AP002345.1-201ENST00000456493 928 ntBASIC5.55□□□□□ -1.52
CDH12P55289 ATP5G1P3-201ENST00000463301 410 ntBASIC5.55□□□□□ -1.52
CDH12P55289 RPS7P10-201ENST00000464254 603 ntBASIC5.55□□□□□ -1.52
CDH12P55289 AC135999.1-201ENST00000478962 479 ntBASIC5.55□□□□□ -1.52
CDH12P55289 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.55□□□□□ -1.52
CDH12P55289 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CDH12P55289 MRPL57P6-201ENST00000506570 309 ntBASIC5.55□□□□□ -1.52
CDH12P55289 RNA5SP434-201ENST00000516647 121 ntBASIC5.55□□□□□ -1.52
CDH12P55289 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.55□□□□□ -1.52
CDH12P55289 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH12P55289 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH12P55289 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH12P55289 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH12P55289 AC092868.3-201ENST00000560515 784 ntBASIC5.55□□□□□ -1.52
CDH12P55289 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CDH12P55289 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH12P55289 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH12P55289 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH12P55289 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH12P55289 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH12P55289 ZNF92P2-201ENST00000600543 1059 ntBASIC5.55□□□□□ -1.52
CDH12P55289 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH12P55289 AC025857.2-201ENST00000602711 238 ntBASIC5.55□□□□□ -1.52
CDH12P55289 HMGB1P51-201ENST00000605166 638 ntBASIC5.55□□□□□ -1.52
CDH12P55289 RPSAP75-201ENST00000605848 301 ntBASIC5.55□□□□□ -1.52
CDH12P55289 AL031658.2-201ENST00000616850 651 ntBASIC5.55□□□□□ -1.52
CDH12P55289 AC005899.6-201ENST00000620729 297 ntBASIC5.55□□□□□ -1.52
CDH12P55289 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH12P55289 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH12P55289 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH12P55289 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH12P55289 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH12P55289 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH12P55289 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH12P55289 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH12P55289 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CDH12P55289 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH12P55289 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CDH12P55289 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH12P55289 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH12P55289 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH12P55289 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH12P55289 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH12P55289 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDH12P55289 U3.10-201ENST00000364459 214 ntBASIC5.54□□□□□ -1.52
CDH12P55289 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDH12P55289 AL139805.1-201ENST00000407837 289 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH12P55289 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH12P55289 MTND4P11-201ENST00000417020 1058 ntBASIC5.54□□□□□ -1.52
CDH12P55289 RPS15AP30-201ENST00000420976 390 ntBASIC5.54□□□□□ -1.52
CDH12P55289 VN1R20P-201ENST00000425215 966 ntBASIC5.54□□□□□ -1.52
CDH12P55289 UBE2D3P3-201ENST00000426992 425 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms