Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.83□□□□□ -1.32
EPHB3P54753 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.83□□□□□ -1.32
EPHB3P54753 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
EPHB3P54753 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.83□□□□□ -1.32
EPHB3P54753 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 AL139384.2-201ENST00000613809 3590 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 MTND5P29-201ENST00000458676 1807 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
EPHB3P54753 CASC19-248ENST00000641674 1356 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 AC007993.1-201ENST00000621298 2430 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.82□□□□□ -1.32
EPHB3P54753 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 TMEM75-201ENST00000624314 2165 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.82□□□□□ -1.32
EPHB3P54753 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.82□□□□□ -1.32
EPHB3P54753 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
EPHB3P54753 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.82□□□□□ -1.32
EPHB3P54753 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.82□□□□□ -1.32
EPHB3P54753 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 AC007485.2-201ENST00000623493 1667 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.82□□□□□ -1.32
EPHB3P54753 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
EPHB3P54753 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
EPHB3P54753 STAG3L4-201ENST00000352103 530 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
EPHB3P54753 MIR16-2-201ENST00000362117 81 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 RNU6-1214P-201ENST00000363650 109 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 RNU6-468P-201ENST00000384003 109 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 RNU6-1320P-201ENST00000390838 107 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 RNU6-1269P-201ENST00000391139 107 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.82□□□□□ -1.32
EPHB3P54753 MIR1282-201ENST00000408865 101 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 AF274854.1-201ENST00000413236 615 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 UBE2V1P9-201ENST00000414760 368 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.82□□□□□ -1.32
EPHB3P54753 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.82□□□□□ -1.32
EPHB3P54753 AC090018.1-201ENST00000434369 367 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.82□□□□□ -1.32
EPHB3P54753 EMC3-AS1-205ENST00000438698 534 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.82□□□□□ -1.32
EPHB3P54753 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.82□□□□□ -1.32
EPHB3P54753 EXTL2P1-201ENST00000446218 416 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.82□□□□□ -1.32
EPHB3P54753 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
EPHB3P54753 HMGB1P7-201ENST00000450921 612 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 HMGB1P26-201ENST00000452520 628 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 OR13C1P-201ENST00000457612 963 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 RNU6-599P-201ENST00000459383 107 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 RNU6-1193P-201ENST00000459461 107 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.82□□□□□ -1.32
EPHB3P54753 RN7SL834P-201ENST00000461450 286 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
EPHB3P54753 AC090114.3-201ENST00000479267 829 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 MTND2P14-201ENST00000482139 351 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.82□□□□□ -1.32
EPHB3P54753 AC021146.10-201ENST00000515628 706 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.82□□□□□ -1.32
EPHB3P54753 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.82□□□□□ -1.32
EPHB3P54753 AP000926.4-201ENST00000527351 454 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 AC005363.1-201ENST00000530779 351 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 AC092865.1-201ENST00000544395 1023 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.82□□□□□ -1.32
EPHB3P54753 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.82□□□□□ -1.32
EPHB3P54753 NDUFA5P11-201ENST00000567995 343 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 MIR4310-201ENST00000582950 57 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.82□□□□□ -1.32
EPHB3P54753 AC079315.1-201ENST00000602952 623 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 AC002069.2-201ENST00000603580 883 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 AC093765.1-201ENST00000603758 881 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 SNORA74.4-201ENST00000607595 199 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 AC116165.2-201ENST00000616705 206 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 U6.42-201ENST00000618440 107 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms