Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.06□□□□□ -1.6
HCFC1P51610 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HCFC1P51610 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
HCFC1P51610 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HCFC1P51610 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HCFC1P51610 AC022164.1-201ENST00000568767 2673 ntBASIC5.06□□□□□ -1.6
HCFC1P51610 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HCFC1P51610 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
HCFC1P51610 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
HCFC1P51610 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.06□□□□□ -1.6
HCFC1P51610 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HCFC1P51610 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HCFC1P51610 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HCFC1P51610 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HCFC1P51610 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.06□□□□□ -1.6
HCFC1P51610 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.06□□□□□ -1.6
HCFC1P51610 RNU4-64P-201ENST00000410795 131 ntBASIC5.06□□□□□ -1.6
HCFC1P51610 NFYAP1-201ENST00000431953 972 ntBASIC5.06□□□□□ -1.6
HCFC1P51610 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.06□□□□□ -1.6
HCFC1P51610 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.06□□□□□ -1.6
HCFC1P51610 AC023141.8-201ENST00000442554 208 ntBASIC5.06□□□□□ -1.6
HCFC1P51610 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.06□□□□□ -1.6
HCFC1P51610 RPS27AP3-201ENST00000453803 454 ntBASIC5.06□□□□□ -1.6
HCFC1P51610 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
HCFC1P51610 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.06□□□□□ -1.6
HCFC1P51610 AC106730.2-201ENST00000566641 540 ntBASIC5.06□□□□□ -1.6
HCFC1P51610 GARSP1-201ENST00000570895 719 ntBASIC5.06□□□□□ -1.6
HCFC1P51610 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.06□□□□□ -1.6
HCFC1P51610 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
HCFC1P51610 MIR6798-201ENST00000612887 67 ntBASIC5.06□□□□□ -1.6
HCFC1P51610 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HCFC1P51610 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HCFC1P51610 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.06□□□□□ -1.6
HCFC1P51610 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
HCFC1P51610 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HCFC1P51610 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
HCFC1P51610 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
HCFC1P51610 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
HCFC1P51610 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.05□□□□□ -1.6
HCFC1P51610 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC5.05□□□□□ -1.6
HCFC1P51610 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
HCFC1P51610 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
HCFC1P51610 AC009779.8-201ENST00000641684 4384 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
HCFC1P51610 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.05□□□□□ -1.6
HCFC1P51610 OR10R3P-201ENST00000361688 942 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 AC006455.6-201ENST00000426192 893 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 CNOT7P2-201ENST00000441051 832 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 AC245047.2-201ENST00000441060 530 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 AC015983.1-201ENST00000441577 373 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 AC100832.1-201ENST00000471945 383 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 RPS4XP1-201ENST00000482189 787 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 AC009120.1-201ENST00000493458 473 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 SCARNA6.1-201ENST00000516989 238 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.05□□□□□ -1.6
HCFC1P51610 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.05□□□□□ -1.6
HCFC1P51610 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.05□□□□□ -1.6
HCFC1P51610 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.05□□□□□ -1.6
HCFC1P51610 OR4A6P-201ENST00000534364 970 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.05□□□□□ -1.6
HCFC1P51610 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.05□□□□□ -1.6
HCFC1P51610 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 RBM22P1-201ENST00000578589 1214 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 AC087783.2-201ENST00000605070 562 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 AF117829.2-201ENST00000619538 361 ntBASIC5.05□□□□□ -1.6
HCFC1P51610 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HCFC1P51610 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.05□□□□□ -1.6
HCFC1P51610 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
HCFC1P51610 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
HCFC1P51610 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCFC1P51610 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.05□□□□□ -1.6
HCFC1P51610 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HCFC1P51610 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.04□□□□□ -1.6
HCFC1P51610 GTF2IP4-201ENST00000453092 2054 ntBASIC5.04□□□□□ -1.6
HCFC1P51610 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HCFC1P51610 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HCFC1P51610 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.04□□□□□ -1.6
HCFC1P51610 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.04□□□□□ -1.6
HCFC1P51610 SNORA70-201ENST00000384436 135 ntBASIC5.04□□□□□ -1.6
HCFC1P51610 RPS27P18-201ENST00000431701 247 ntBASIC5.04□□□□□ -1.6
HCFC1P51610 OR7E116P-201ENST00000448529 957 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms