Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.9□□□□□ -1.46
BRCA2P51587 TPM3P3-201ENST00000521343 354 ntBASIC5.9□□□□□ -1.46
BRCA2P51587 MORF4L1P3-201ENST00000525966 950 ntBASIC5.9□□□□□ -1.46
BRCA2P51587 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.9□□□□□ -1.46
BRCA2P51587 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.9□□□□□ -1.46
BRCA2P51587 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.9□□□□□ -1.46
BRCA2P51587 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
BRCA2P51587 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.9□□□□□ -1.46
BRCA2P51587 ASNSP1-204ENST00000641977 1664 ntBASIC5.9□□□□□ -1.46
BRCA2P51587 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
BRCA2P51587 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.9□□□□□ -1.46
BRCA2P51587 U3.3-201ENST00000362986 216 ntBASIC5.9□□□□□ -1.46
BRCA2P51587 NUDT19P3-201ENST00000404698 555 ntBASIC5.9□□□□□ -1.46
BRCA2P51587 GPS2P1-201ENST00000411761 986 ntBASIC5.9□□□□□ -1.46
BRCA2P51587 HSPD1P12-201ENST00000429127 1069 ntBASIC5.9□□□□□ -1.46
BRCA2P51587 AL731534.1-201ENST00000434711 269 ntBASIC5.9□□□□□ -1.46
BRCA2P51587 RN7SKP92-201ENST00000517266 244 ntBASIC5.9□□□□□ -1.46
BRCA2P51587 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.9□□□□□ -1.46
BRCA2P51587 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
BRCA2P51587 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
BRCA2P51587 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
BRCA2P51587 MIR208A-201ENST00000362287 71 ntBASIC5.9□□□□□ -1.47
BRCA2P51587 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
BRCA2P51587 OR52A4P-201ENST00000472867 958 ntBASIC5.9□□□□□ -1.47
BRCA2P51587 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
BRCA2P51587 AP000889.1-201ENST00000530968 660 ntBASIC5.9□□□□□ -1.47
BRCA2P51587 AL121594.2-201ENST00000541658 472 ntBASIC5.9□□□□□ -1.47
BRCA2P51587 AC084824.1-201ENST00000550917 1005 ntBASIC5.9□□□□□ -1.47
BRCA2P51587 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.9□□□□□ -1.47
BRCA2P51587 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.9□□□□□ -1.47
BRCA2P51587 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.9□□□□□ -1.47
BRCA2P51587 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
BRCA2P51587 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
BRCA2P51587 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.47
BRCA2P51587 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC5.89□□□□□ -1.47
BRCA2P51587 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC5.89□□□□□ -1.47
BRCA2P51587 AC022034.1-201ENST00000512867 2156 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC5.89□□□□□ -1.47
BRCA2P51587 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
BRCA2P51587 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.89□□□□□ -1.47
BRCA2P51587 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.89□□□□□ -1.47
BRCA2P51587 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.89□□□□□ -1.47
BRCA2P51587 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.89□□□□□ -1.47
BRCA2P51587 AL034374.2-201ENST00000605281 548 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
BRCA2P51587 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
BRCA2P51587 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 AC025750.1-201ENST00000399891 379 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 MIR1182-201ENST00000408363 97 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 NPM1P33-201ENST00000438918 872 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 NIP7P2-201ENST00000485801 544 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 AC090058.1-201ENST00000498788 435 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.89□□□□□ -1.47
BRCA2P51587 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.89□□□□□ -1.47
BRCA2P51587 NANOGP3-201ENST00000605855 286 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 AC006338.2-201ENST00000616864 791 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 AL122126.1-201ENST00000546905 1318 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 TENM2-207ENST00000520394 8034 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
BRCA2P51587 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 AL365220.1-201ENST00000432923 399 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.89□□□□□ -1.47
BRCA2P51587 RSU1P1-201ENST00000453416 441 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.89□□□□□ -1.47
BRCA2P51587 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.89□□□□□ -1.47
BRCA2P51587 AC006511.3-201ENST00000624929 1783 ntBASIC5.89□□□□□ -1.47
BRCA2P51587 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.89□□□□□ -1.47
BRCA2P51587 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BRCA2P51587 MAPK10-270ENST00000641102 3538 ntBASIC5.88□□□□□ -1.47
BRCA2P51587 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.88□□□□□ -1.47
BRCA2P51587 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.88□□□□□ -1.47
BRCA2P51587 CHEK2P3-201ENST00000416118 248 ntBASIC5.88□□□□□ -1.47
BRCA2P51587 AK3P5-201ENST00000432033 519 ntBASIC5.88□□□□□ -1.47
BRCA2P51587 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.88□□□□□ -1.47
BRCA2P51587 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.88□□□□□ -1.47
BRCA2P51587 PABPC1P8-201ENST00000452851 2086 ntBASIC5.88□□□□□ -1.47
BRCA2P51587 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
BRCA2P51587 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
BRCA2P51587 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms