Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.07□□□□□ -1.6
CX3CR1P49238 AC099521.1-201ENST00000482557 334 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 NPM1P28-201ENST00000492269 840 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.07□□□□□ -1.6
CX3CR1P49238 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.07□□□□□ -1.6
CX3CR1P49238 GAPDHP71-201ENST00000511530 1003 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.07□□□□□ -1.6
CX3CR1P49238 IGKV3D-25-201ENST00000519599 235 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.07□□□□□ -1.6
CX3CR1P49238 WBP1LP3-201ENST00000523033 208 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.07□□□□□ -1.6
CX3CR1P49238 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.07□□□□□ -1.6
CX3CR1P49238 MIR4776-2-201ENST00000580204 80 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 AC090236.2-201ENST00000587933 1101 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 AC002069.2-201ENST00000603580 883 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 HIRAP1-201ENST00000605318 787 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.07□□□□□ -1.6
CX3CR1P49238 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CX3CR1P49238 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CX3CR1P49238 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.07□□□□□ -1.6
CX3CR1P49238 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.07□□□□□ -1.6
CX3CR1P49238 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CX3CR1P49238 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CX3CR1P49238 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CX3CR1P49238 HCFC2P1-201ENST00000392864 1592 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CX3CR1P49238 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CX3CR1P49238 AP000473.2-201ENST00000602659 1537 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.07□□□□□ -1.6
CX3CR1P49238 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CX3CR1P49238 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.06□□□□□ -1.6
CX3CR1P49238 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CR1P49238 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
CX3CR1P49238 RN7SKP171-201ENST00000364417 303 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 RN7SKP81-201ENST00000365603 331 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 AL096711.1-201ENST00000404780 554 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AC019205.1-201ENST00000421830 730 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 AC244033.1-201ENST00000426826 870 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CR1P49238 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CR1P49238 OR7E116P-201ENST00000448529 957 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 CFL1P4-201ENST00000451536 498 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AC023194.2-201ENST00000465398 406 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 RN7SL197P-201ENST00000466981 299 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 AC017007.3-201ENST00000479865 435 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CR1P49238 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CR1P49238 HSD3BP3-201ENST00000514706 994 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.06□□□□□ -1.6
CX3CR1P49238 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.06□□□□□ -1.6
CX3CR1P49238 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AC084824.2-201ENST00000548906 345 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AC027216.1-201ENST00000577726 685 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AL353729.2-201ENST00000605859 1249 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 MIR6809-201ENST00000612189 116 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AP001052.1-201ENST00000626421 99 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 CASC19-238ENST00000641523 1558 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CR1P49238 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CR1P49238 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CR1P49238 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CR1P49238 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.06□□□□□ -1.6
CX3CR1P49238 AC104966.1-201ENST00000467010 1464 ntBASIC5.06□□□□□ -1.6
CX3CR1P49238 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CX3CR1P49238 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CX3CR1P49238 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.05□□□□□ -1.6
CX3CR1P49238 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CR1P49238 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.05□□□□□ -1.6
CX3CR1P49238 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CX3CR1P49238 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.05□□□□□ -1.6
CX3CR1P49238 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CR1P49238 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CR1P49238 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.05□□□□□ -1.6
CX3CR1P49238 AC117409.1-201ENST00000470499 1310 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CR1P49238 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CR1P49238 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CR1P49238 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CR1P49238 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CR1P49238 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CX3CR1P49238 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CR1P49238 RNFT1P3-201ENST00000340898 1052 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 RN7SKP69-201ENST00000365390 305 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.05□□□□□ -1.6
CX3CR1P49238 AC087752.1-201ENST00000391360 558 ntBASIC5.05□□□□□ -1.6
CX3CR1P49238 MIR1275-201ENST00000408770 80 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms