Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 TRAV11-201ENST00000539512 339 ntBASIC6.11□□□□□ -1.43
LHX1P48742 AC022404.1-201ENST00000555320 273 ntBASIC6.11□□□□□ -1.43
LHX1P48742 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.11□□□□□ -1.43
LHX1P48742 AC020978.7-201ENST00000575953 1187 ntBASIC6.11□□□□□ -1.43
LHX1P48742 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.11□□□□□ -1.43
LHX1P48742 MIR4505-201ENST00000582238 73 ntBASIC6.11□□□□□ -1.43
LHX1P48742 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.11□□□□□ -1.43
LHX1P48742 AP003400.2-201ENST00000624036 666 ntBASIC6.11□□□□□ -1.43
LHX1P48742 MFSD8-239ENST00000641590 2479 ntBASIC6.11□□□□□ -1.43
LHX1P48742 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.11□□□□□ -1.43
LHX1P48742 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
LHX1P48742 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.1□□□□□ -1.43
LHX1P48742 ZNF402P-201ENST00000404435 3100 ntBASIC6.1□□□□□ -1.43
LHX1P48742 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.1□□□□□ -1.43
LHX1P48742 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.1□□□□□ -1.43
LHX1P48742 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.1□□□□□ -1.43
LHX1P48742 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.1□□□□□ -1.43
LHX1P48742 AC027279.1-201ENST00000568885 4284 ntBASIC6.1□□□□□ -1.43
LHX1P48742 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 GTF2IP4-201ENST00000453092 2054 ntBASIC6.1□□□□□ -1.43
LHX1P48742 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.1□□□□□ -1.43
LHX1P48742 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
LHX1P48742 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 AC007842.1-201ENST00000597336 2039 ntBASIC6.1□□□□□ -1.43
LHX1P48742 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 GNG5P2-201ENST00000372054 207 ntBASIC6.1□□□□□ -1.43
LHX1P48742 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
LHX1P48742 AL121977.1-201ENST00000401636 979 ntBASIC6.1□□□□□ -1.43
LHX1P48742 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.1□□□□□ -1.43
LHX1P48742 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.1□□□□□ -1.43
LHX1P48742 RANP7-201ENST00000418085 644 ntBASIC6.1□□□□□ -1.43
LHX1P48742 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.1□□□□□ -1.43
LHX1P48742 AC113412.1-201ENST00000425840 504 ntBASIC6.1□□□□□ -1.43
LHX1P48742 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.1□□□□□ -1.43
LHX1P48742 UBE2V2P1-201ENST00000434717 398 ntBASIC6.1□□□□□ -1.43
LHX1P48742 LDHAP2-201ENST00000437325 985 ntBASIC6.1□□□□□ -1.43
LHX1P48742 AP000281.1-201ENST00000444036 316 ntBASIC6.1□□□□□ -1.43
LHX1P48742 PPIAP20-201ENST00000449839 135 ntBASIC6.1□□□□□ -1.43
LHX1P48742 RSU1P1-201ENST00000453416 441 ntBASIC6.1□□□□□ -1.43
LHX1P48742 MEMO1P4-201ENST00000453590 386 ntBASIC6.1□□□□□ -1.43
LHX1P48742 AC023141.9-201ENST00000458734 412 ntBASIC6.1□□□□□ -1.43
LHX1P48742 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
LHX1P48742 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.1□□□□□ -1.43
LHX1P48742 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.1□□□□□ -1.43
LHX1P48742 AC138866.2-201ENST00000508650 584 ntBASIC6.1□□□□□ -1.43
LHX1P48742 AC106872.4-201ENST00000510050 523 ntBASIC6.1□□□□□ -1.43
LHX1P48742 AC074087.1-201ENST00000512059 724 ntBASIC6.1□□□□□ -1.43
LHX1P48742 AC008676.3-201ENST00000521237 435 ntBASIC6.1□□□□□ -1.43
LHX1P48742 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.1□□□□□ -1.43
LHX1P48742 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.1□□□□□ -1.43
LHX1P48742 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.1□□□□□ -1.43
LHX1P48742 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.1□□□□□ -1.43
LHX1P48742 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.1□□□□□ -1.43
LHX1P48742 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.1□□□□□ -1.43
LHX1P48742 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.1□□□□□ -1.43
LHX1P48742 NF1P10-201ENST00000613227 742 ntBASIC6.1□□□□□ -1.43
LHX1P48742 AC007683.2-201ENST00000624681 714 ntBASIC6.1□□□□□ -1.43
LHX1P48742 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.1□□□□□ -1.43
LHX1P48742 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.1□□□□□ -1.43
LHX1P48742 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.1□□□□□ -1.43
LHX1P48742 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
LHX1P48742 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX1P48742 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LHX1P48742 AC005225.5-201ENST00000623547 2225 ntBASIC6.09□□□□□ -1.43
LHX1P48742 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.09□□□□□ -1.43
LHX1P48742 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LHX1P48742 RPL11P3-201ENST00000395256 523 ntBASIC6.09□□□□□ -1.43
LHX1P48742 RPL7P58-201ENST00000402913 758 ntBASIC6.09□□□□□ -1.43
LHX1P48742 RMRPP5-201ENST00000411156 267 ntBASIC6.09□□□□□ -1.43
LHX1P48742 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.09□□□□□ -1.43
LHX1P48742 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.09□□□□□ -1.43
LHX1P48742 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.09□□□□□ -1.43
LHX1P48742 NPM1P48-201ENST00000436002 853 ntBASIC6.09□□□□□ -1.43
LHX1P48742 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.09□□□□□ -1.43
LHX1P48742 AL450996.1-201ENST00000445574 1202 ntBASIC6.09□□□□□ -1.43
LHX1P48742 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
LHX1P48742 SUMO2P19-201ENST00000518920 295 ntBASIC6.09□□□□□ -1.43
LHX1P48742 AC022784.5-201ENST00000522241 437 ntBASIC6.09□□□□□ -1.43
LHX1P48742 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.09□□□□□ -1.43
LHX1P48742 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.09□□□□□ -1.43
LHX1P48742 AC027544.3-201ENST00000535082 757 ntBASIC6.09□□□□□ -1.43
LHX1P48742 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.09□□□□□ -1.43
LHX1P48742 AL049872.1-201ENST00000556323 322 ntBASIC6.09□□□□□ -1.43
LHX1P48742 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.09□□□□□ -1.43
LHX1P48742 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.09□□□□□ -1.43
LHX1P48742 AC010615.3-201ENST00000597319 394 ntBASIC6.09□□□□□ -1.43
LHX1P48742 AL513327.3-201ENST00000602618 469 ntBASIC6.09□□□□□ -1.43
LHX1P48742 FO393422.1-201ENST00000603908 708 ntBASIC6.09□□□□□ -1.43
LHX1P48742 AL133481.2-203ENST00000607558 139 ntBASIC6.09□□□□□ -1.43
LHX1P48742 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms