Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC025857.2-201ENST00000602711 238 ntBASIC5.6□□□□□ -1.51
SLC6A12P48065 AL031601.1-201ENST00000605702 394 ntBASIC5.6□□□□□ -1.51
SLC6A12P48065 MIR6071-201ENST00000616741 78 ntBASIC5.6□□□□□ -1.51
SLC6A12P48065 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A12P48065 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A12P48065 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SLC6A12P48065 THAP12P8-201ENST00000447914 2115 ntBASIC5.6□□□□□ -1.51
SLC6A12P48065 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A12P48065 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC6A12P48065 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SLC6A12P48065 NCOA4P2-201ENST00000340589 1813 ntBASIC5.6□□□□□ -1.51
SLC6A12P48065 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC6A12P48065 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC6A12P48065 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A12P48065 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A12P48065 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A12P48065 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC6A12P48065 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A12P48065 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A12P48065 AL355834.1-201ENST00000556602 3965 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.59□□□□□ -1.51
SLC6A12P48065 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC6A12P48065 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A12P48065 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A12P48065 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SLC6A12P48065 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A12P48065 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
SLC6A12P48065 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SLC6A12P48065 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A12P48065 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A12P48065 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A12P48065 RN7SKP275-201ENST00000364626 301 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 SUGT1P2-201ENST00000379452 992 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 RNU1-136P-201ENST00000384181 164 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 MIR130A-201ENST00000385274 89 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A12P48065 AC004386.1-201ENST00000393214 761 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 AC240504.1-201ENST00000395709 845 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A12P48065 RNGTTP1-201ENST00000420965 728 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A12P48065 PCBP2P1-201ENST00000437262 977 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 LDHAP2-201ENST00000437325 985 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A12P48065 RPS10P18-201ENST00000442662 495 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A12P48065 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A12P48065 AP000926.3-201ENST00000497201 299 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A12P48065 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.59□□□□□ -1.51
SLC6A12P48065 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
SLC6A12P48065 RFPL4AP3-201ENST00000515267 345 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 SNORD116-30-201ENST00000516468 85 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A12P48065 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A12P48065 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SLC6A12P48065 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A12P48065 AL118556.2-201ENST00000614375 824 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A12P48065 AL035661.1-201ENST00000620459 1144 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A12P48065 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.59□□□□□ -1.51
SLC6A12P48065 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SLC6A12P48065 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.59□□□□□ -1.51
SLC6A12P48065 AL355488.2-201ENST00000609909 2850 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 AC138907.8-201ENST00000623981 2256 ntBASIC5.59□□□□□ -1.51
SLC6A12P48065 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.59□□□□□ -1.52
SLC6A12P48065 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SLC6A12P48065 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.59□□□□□ -1.52
SLC6A12P48065 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
SLC6A12P48065 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
SLC6A12P48065 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC6A12P48065 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A12P48065 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SLC6A12P48065 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A12P48065 MTCO1P22-201ENST00000604619 1360 ntBASIC5.58□□□□□ -1.52
SLC6A12P48065 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A12P48065 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SLC6A12P48065 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A12P48065 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A12P48065 MIR1203-201ENST00000408812 85 ntBASIC5.58□□□□□ -1.52
SLC6A12P48065 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.58□□□□□ -1.52
SLC6A12P48065 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC6A12P48065 RPL12P43-201ENST00000420608 499 ntBASIC5.58□□□□□ -1.52
SLC6A12P48065 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC6A12P48065 AL034379.1-201ENST00000423216 253 ntBASIC5.58□□□□□ -1.52
SLC6A12P48065 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC6A12P48065 AC110602.1-201ENST00000437414 318 ntBASIC5.58□□□□□ -1.52
SLC6A12P48065 AL161722.1-201ENST00000446972 1032 ntBASIC5.58□□□□□ -1.52
SLC6A12P48065 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC6A12P48065 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC6A12P48065 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC6A12P48065 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC6A12P48065 AC074255.1-201ENST00000511259 501 ntBASIC5.58□□□□□ -1.52
SLC6A12P48065 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC6A12P48065 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC6A12P48065 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC6A12P48065 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC6A12P48065 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms