Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC074255.1-201ENST00000511259 501 ntBASIC6.1□□□□□ -1.43
BRCC3P46736 AC078899.1-201ENST00000521432 1185 ntBASIC6.1□□□□□ -1.43
BRCC3P46736 IGKV2-18-201ENST00000522607 343 ntBASIC6.1□□□□□ -1.43
BRCC3P46736 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.1□□□□□ -1.43
BRCC3P46736 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.1□□□□□ -1.43
BRCC3P46736 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.1□□□□□ -1.43
BRCC3P46736 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.1□□□□□ -1.43
BRCC3P46736 OR7A8P-201ENST00000595427 913 ntBASIC6.1□□□□□ -1.43
BRCC3P46736 AL352984.2-202ENST00000613699 155 ntBASIC6.1□□□□□ -1.43
BRCC3P46736 AC007204.2-201ENST00000615022 616 ntBASIC6.1□□□□□ -1.43
BRCC3P46736 AC069234.4-201ENST00000621276 412 ntBASIC6.1□□□□□ -1.43
BRCC3P46736 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
BRCC3P46736 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
BRCC3P46736 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
BRCC3P46736 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
BRCC3P46736 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRCC3P46736 AL449283.1-201ENST00000602631 3403 ntBASIC6.1□□□□□ -1.43
BRCC3P46736 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRCC3P46736 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRCC3P46736 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRCC3P46736 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRCC3P46736 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRCC3P46736 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BRCC3P46736 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
BRCC3P46736 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRCC3P46736 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRCC3P46736 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
BRCC3P46736 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRCC3P46736 RNA5SP514-201ENST00000363717 111 ntBASIC6.09□□□□□ -1.43
BRCC3P46736 RNA5SP30-201ENST00000365552 115 ntBASIC6.09□□□□□ -1.43
BRCC3P46736 RPS6P23-201ENST00000413224 722 ntBASIC6.09□□□□□ -1.43
BRCC3P46736 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.09□□□□□ -1.43
BRCC3P46736 RPS3AP38-201ENST00000435889 763 ntBASIC6.09□□□□□ -1.43
BRCC3P46736 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.09□□□□□ -1.43
BRCC3P46736 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.09□□□□□ -1.43
BRCC3P46736 AL451063.1-201ENST00000450164 1133 ntBASIC6.09□□□□□ -1.43
BRCC3P46736 RANP1-206ENST00000455094 651 ntBASIC6.09□□□□□ -1.43
BRCC3P46736 TRBV5-2-201ENST00000489095 273 ntBASIC6.09□□□□□ -1.43
BRCC3P46736 AC108693.1-201ENST00000496068 432 ntBASIC6.09□□□□□ -1.43
BRCC3P46736 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.09□□□□□ -1.43
BRCC3P46736 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.09□□□□□ -1.43
BRCC3P46736 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.09□□□□□ -1.43
BRCC3P46736 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.09□□□□□ -1.43
BRCC3P46736 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.09□□□□□ -1.43
BRCC3P46736 MRPS21P7-201ENST00000566937 238 ntBASIC6.09□□□□□ -1.43
BRCC3P46736 NPM1P45-201ENST00000583151 559 ntBASIC6.09□□□□□ -1.43
BRCC3P46736 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.09□□□□□ -1.43
BRCC3P46736 AC016590.3-201ENST00000611171 753 ntBASIC6.09□□□□□ -1.43
BRCC3P46736 AL035661.1-201ENST00000620459 1144 ntBASIC6.09□□□□□ -1.43
BRCC3P46736 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.09□□□□□ -1.43
BRCC3P46736 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRCC3P46736 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRCC3P46736 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRCC3P46736 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BRCC3P46736 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.09□□□□□ -1.44
BRCC3P46736 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
BRCC3P46736 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
BRCC3P46736 Z83820.1-201ENST00000456978 1499 ntBASIC6.09□□□□□ -1.44
BRCC3P46736 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
BRCC3P46736 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.09□□□□□ -1.44
BRCC3P46736 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.08□□□□□ -1.44
BRCC3P46736 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.08□□□□□ -1.44
BRCC3P46736 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.08□□□□□ -1.44
BRCC3P46736 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
BRCC3P46736 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
BRCC3P46736 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.08□□□□□ -1.44
BRCC3P46736 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.08□□□□□ -1.44
BRCC3P46736 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.08□□□□□ -1.44
BRCC3P46736 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 MIR1178-201ENST00000408396 91 ntBASIC6.08□□□□□ -1.44
BRCC3P46736 GABARAPL3-201ENST00000412799 354 ntBASIC6.08□□□□□ -1.44
BRCC3P46736 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.08□□□□□ -1.44
BRCC3P46736 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.08□□□□□ -1.44
BRCC3P46736 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.08□□□□□ -1.44
BRCC3P46736 LDHBP2-201ENST00000456969 1005 ntBASIC6.08□□□□□ -1.44
BRCC3P46736 AL133445.1-201ENST00000467051 452 ntBASIC6.08□□□□□ -1.44
BRCC3P46736 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.08□□□□□ -1.44
BRCC3P46736 UBA52P7-201ENST00000486088 380 ntBASIC6.08□□□□□ -1.44
BRCC3P46736 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.08□□□□□ -1.44
BRCC3P46736 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.08□□□□□ -1.44
BRCC3P46736 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.08□□□□□ -1.44
BRCC3P46736 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.08□□□□□ -1.44
BRCC3P46736 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.08□□□□□ -1.44
BRCC3P46736 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.08□□□□□ -1.44
BRCC3P46736 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 RBM22P12-201ENST00000567098 1255 ntBASIC6.08□□□□□ -1.44
BRCC3P46736 ADAM3B-201ENST00000569937 840 ntBASIC6.08□□□□□ -1.44
BRCC3P46736 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.08□□□□□ -1.44
BRCC3P46736 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.08□□□□□ -1.44
BRCC3P46736 AL138960.1-201ENST00000613838 513 ntBASIC6.08□□□□□ -1.44
BRCC3P46736 AL359513.1-201ENST00000614364 557 ntBASIC6.08□□□□□ -1.44
BRCC3P46736 AC090607.5-201ENST00000615692 224 ntBASIC6.08□□□□□ -1.44
BRCC3P46736 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.08□□□□□ -1.44
BRCC3P46736 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms