Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC091167.1-201ENST00000492017 396 ntBASIC5.94□□□□□ -1.46
HTTP42858 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.94□□□□□ -1.46
HTTP42858 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.94□□□□□ -1.46
HTTP42858 AC006115.2-201ENST00000596823 202 ntBASIC5.94□□□□□ -1.46
HTTP42858 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC5.94□□□□□ -1.46
HTTP42858 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 HSPD1P7-201ENST00000447985 1686 ntBASIC5.94□□□□□ -1.46
HTTP42858 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.94□□□□□ -1.46
HTTP42858 NCOA4P3-201ENST00000513203 1877 ntBASIC5.94□□□□□ -1.46
HTTP42858 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 MIR23B-201ENST00000384832 97 ntBASIC5.94□□□□□ -1.46
HTTP42858 DNAJA1P6-201ENST00000437347 354 ntBASIC5.94□□□□□ -1.46
HTTP42858 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.94□□□□□ -1.46
HTTP42858 AC009643.1-201ENST00000532030 391 ntBASIC5.94□□□□□ -1.46
HTTP42858 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.94□□□□□ -1.46
HTTP42858 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.94□□□□□ -1.46
HTTP42858 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.94□□□□□ -1.46
HTTP42858 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.94□□□□□ -1.46
HTTP42858 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC5.93□□□□□ -1.46
HTTP42858 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.93□□□□□ -1.46
HTTP42858 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.93□□□□□ -1.46
HTTP42858 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC5.93□□□□□ -1.46
HTTP42858 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 AL049697.2-201ENST00000403708 294 ntBASIC5.93□□□□□ -1.46
HTTP42858 AC011497.2-201ENST00000600255 639 ntBASIC5.93□□□□□ -1.46
HTTP42858 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 AC114774.1-201ENST00000507410 1770 ntBASIC5.93□□□□□ -1.46
HTTP42858 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
HTTP42858 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC5.93□□□□□ -1.46
HTTP42858 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
HTTP42858 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HTTP42858 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.93□□□□□ -1.46
HTTP42858 AL008638.3-201ENST00000623027 5182 ntBASIC5.93□□□□□ -1.46
HTTP42858 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HTTP42858 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.93□□□□□ -1.46
HTTP42858 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 NANOGP9-201ENST00000439890 892 ntBASIC5.93□□□□□ -1.46
HTTP42858 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.93□□□□□ -1.46
HTTP42858 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.93□□□□□ -1.46
HTTP42858 AP000797.2-201ENST00000475768 606 ntBASIC5.93□□□□□ -1.46
HTTP42858 NIP7P2-201ENST00000485801 544 ntBASIC5.93□□□□□ -1.46
HTTP42858 SCARNA16.4-201ENST00000516956 187 ntBASIC5.93□□□□□ -1.46
HTTP42858 OR4A17P-201ENST00000526032 904 ntBASIC5.93□□□□□ -1.46
HTTP42858 AC067959.1-201ENST00000604334 379 ntBASIC5.93□□□□□ -1.46
HTTP42858 AL359955.1-201ENST00000455242 3275 ntBASIC5.93□□□□□ -1.46
HTTP42858 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.93□□□□□ -1.46
HTTP42858 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 AL589993.1-201ENST00000407450 2524 ntBASIC5.93□□□□□ -1.46
HTTP42858 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC5.93□□□□□ -1.46
HTTP42858 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
HTTP42858 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HTTP42858 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC5.92□□□□□ -1.46
HTTP42858 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 RNU4-39P-201ENST00000362455 127 ntBASIC5.92□□□□□ -1.46
HTTP42858 SNORA70.4-201ENST00000365509 134 ntBASIC5.92□□□□□ -1.46
HTTP42858 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 TMA16P2-201ENST00000413187 601 ntBASIC5.92□□□□□ -1.46
HTTP42858 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.92□□□□□ -1.46
HTTP42858 EEF1A1P1-201ENST00000447052 739 ntBASIC5.92□□□□□ -1.46
HTTP42858 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 HMGN2P25-201ENST00000486956 268 ntBASIC5.92□□□□□ -1.46
HTTP42858 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.92□□□□□ -1.46
HTTP42858 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.92□□□□□ -1.46
HTTP42858 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC5.92□□□□□ -1.46
HTTP42858 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
HTTP42858 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 AP003170.5-201ENST00000397185 335 ntBASIC5.92□□□□□ -1.46
HTTP42858 AC016027.5-201ENST00000427227 210 ntBASIC5.92□□□□□ -1.46
HTTP42858 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.92□□□□□ -1.46
HTTP42858 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 CDC27P1-201ENST00000445384 715 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms