Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RPS4XP1-201ENST00000482189 787 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.3□□□□□ -1.24
COL15A1P39059 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC7.3□□□□□ -1.24
COL15A1P39059 TOMM22P4-201ENST00000511318 336 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 RN7SKP288-201ENST00000516227 268 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.3□□□□□ -1.24
COL15A1P39059 MRPS21P7-201ENST00000566937 238 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.3□□□□□ -1.24
COL15A1P39059 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.3□□□□□ -1.24
COL15A1P39059 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC7.3□□□□□ -1.24
COL15A1P39059 AC010245.2-201ENST00000606908 1167 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL15A1P39059 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.3□□□□□ -1.24
COL15A1P39059 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.3□□□□□ -1.24
COL15A1P39059 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.3□□□□□ -1.24
COL15A1P39059 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
COL15A1P39059 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL15A1P39059 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
COL15A1P39059 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.3□□□□□ -1.24
COL15A1P39059 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL15A1P39059 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL15A1P39059 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
COL15A1P39059 MRRFP1-201ENST00000435941 1675 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 MFSD8-219ENST00000641228 2559 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
COL15A1P39059 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.29□□□□□ -1.24
COL15A1P39059 AC010168.2-201ENST00000562691 5428 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL15A1P39059 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.29□□□□□ -1.24
COL15A1P39059 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL15A1P39059 RNA5SP319-201ENST00000362768 119 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 RNA5SP507-201ENST00000363603 121 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 RNU1-59P-201ENST00000364829 162 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL15A1P39059 AL121977.1-201ENST00000401636 979 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.29□□□□□ -1.24
COL15A1P39059 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC7.29□□□□□ -1.24
COL15A1P39059 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL15A1P39059 RPS27P18-201ENST00000431701 247 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL15A1P39059 VDAC2P4-201ENST00000452925 711 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 AP000547.1-201ENST00000454360 617 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.29□□□□□ -1.24
COL15A1P39059 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.29□□□□□ -1.24
COL15A1P39059 RN7SL222P-201ENST00000476452 299 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 RN7SL570P-201ENST00000484405 292 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 TRBV5-2-201ENST00000489095 273 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 CSNK1A1P3-201ENST00000504105 330 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 MTND2P31-201ENST00000512602 616 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.29□□□□□ -1.24
COL15A1P39059 CDC42P3-201ENST00000518493 633 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 AC090424.1-201ENST00000535243 736 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 AC004825.1-201ENST00000555068 586 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.29□□□□□ -1.24
COL15A1P39059 U1.25-201ENST00000614085 162 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 RPSAP73-201ENST00000614820 330 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 U1.34-201ENST00000618578 162 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 U1.31-201ENST00000620022 160 ntBASIC7.29□□□□□ -1.24
COL15A1P39059 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.29□□□□□ -1.24
COL15A1P39059 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.29□□□□□ -1.24
COL15A1P39059 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL15A1P39059 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL15A1P39059 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL15A1P39059 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL15A1P39059 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
COL15A1P39059 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL15A1P39059 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL15A1P39059 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL15A1P39059 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL15A1P39059 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL15A1P39059 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.28□□□□□ -1.24
COL15A1P39059 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL15A1P39059 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL15A1P39059 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.28□□□□□ -1.24
COL15A1P39059 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL15A1P39059 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.28□□□□□ -1.24
COL15A1P39059 SNORD1C-201ENST00000363315 78 ntBASIC7.28□□□□□ -1.24
COL15A1P39059 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.28□□□□□ -1.24
COL15A1P39059 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL15A1P39059 AL645927.1-201ENST00000396783 406 ntBASIC7.28□□□□□ -1.24
COL15A1P39059 FAM204CP-201ENST00000424489 642 ntBASIC7.28□□□□□ -1.24
COL15A1P39059 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL15A1P39059 AL365220.1-201ENST00000432923 399 ntBASIC7.28□□□□□ -1.24
COL15A1P39059 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
COL15A1P39059 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.28□□□□□ -1.24
COL15A1P39059 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL15A1P39059 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.28□□□□□ -1.24
COL15A1P39059 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.28□□□□□ -1.24
COL15A1P39059 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.28□□□□□ -1.24
COL15A1P39059 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.28□□□□□ -1.24
COL15A1P39059 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
COL15A1P39059 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC7.28□□□□□ -1.24
COL15A1P39059 OR10G5P-201ENST00000532733 358 ntBASIC7.28□□□□□ -1.24
COL15A1P39059 EIF1AXP2-201ENST00000555940 413 ntBASIC7.28□□□□□ -1.24
COL15A1P39059 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.28□□□□□ -1.24
COL15A1P39059 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.28□□□□□ -1.24
COL15A1P39059 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.28□□□□□ -1.24
COL15A1P39059 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.28□□□□□ -1.24
COL15A1P39059 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.28□□□□□ -1.24
COL15A1P39059 AC005520.3-201ENST00000602874 370 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms