Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
XRCC1P18887 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
XRCC1P18887 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
XRCC1P18887 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 AL442128.2-201ENST00000620246 1824 ntBASIC5.77□□□□□ -1.49
XRCC1P18887 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 RN7SKP269-201ENST00000365545 319 ntBASIC5.77□□□□□ -1.49
XRCC1P18887 RNA5SP284-201ENST00000384547 118 ntBASIC5.77□□□□□ -1.49
XRCC1P18887 AC245060.4-201ENST00000413293 1121 ntBASIC5.77□□□□□ -1.49
XRCC1P18887 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.77□□□□□ -1.49
XRCC1P18887 RPS4XP5-201ENST00000419038 768 ntBASIC5.77□□□□□ -1.49
XRCC1P18887 BX323845.3-201ENST00000428215 527 ntBASIC5.77□□□□□ -1.49
XRCC1P18887 MTND6P12-201ENST00000428247 522 ntBASIC5.77□□□□□ -1.49
XRCC1P18887 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.77□□□□□ -1.49
XRCC1P18887 CUBNP2-201ENST00000443534 1139 ntBASIC5.77□□□□□ -1.49
XRCC1P18887 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.77□□□□□ -1.49
XRCC1P18887 RPL31P15-201ENST00000449770 338 ntBASIC5.77□□□□□ -1.49
XRCC1P18887 PPIAP19-201ENST00000486414 492 ntBASIC5.77□□□□□ -1.49
XRCC1P18887 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.77□□□□□ -1.49
XRCC1P18887 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.77□□□□□ -1.49
XRCC1P18887 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.77□□□□□ -1.49
XRCC1P18887 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.77□□□□□ -1.49
XRCC1P18887 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.77□□□□□ -1.49
XRCC1P18887 AL139099.4-201ENST00000614802 114 ntBASIC5.77□□□□□ -1.49
XRCC1P18887 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
XRCC1P18887 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
XRCC1P18887 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
XRCC1P18887 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 AC005261.2-201ENST00000593427 4258 ntBASIC5.77□□□□□ -1.49
XRCC1P18887 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
XRCC1P18887 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
XRCC1P18887 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
XRCC1P18887 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.77□□□□□ -1.49
XRCC1P18887 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
XRCC1P18887 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
XRCC1P18887 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
XRCC1P18887 AC106872.5-201ENST00000508856 1416 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
XRCC1P18887 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 MIR133A2-201ENST00000347538 102 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 RNA5SP211-201ENST00000365516 117 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
XRCC1P18887 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.76□□□□□ -1.49
XRCC1P18887 METTL15P3-201ENST00000415522 1221 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.76□□□□□ -1.49
XRCC1P18887 MTND2P40-201ENST00000436718 841 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 AC073072.2-201ENST00000447425 348 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 RSU1P1-201ENST00000453416 441 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 ACA64.4-201ENST00000459070 127 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 AC099521.1-201ENST00000482557 334 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
XRCC1P18887 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 MTATP6P1-201ENST00000514057 681 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 RN7SKP288-201ENST00000516227 268 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 IGLVIV-64-201ENST00000518581 301 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 IGKV3D-34-201ENST00000522638 302 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 OR8Q1P-201ENST00000526467 655 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.76□□□□□ -1.49
XRCC1P18887 AC126615.2-201ENST00000553003 515 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.76□□□□□ -1.49
XRCC1P18887 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.76□□□□□ -1.49
XRCC1P18887 MIR4433B-201ENST00000581329 102 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.76□□□□□ -1.49
XRCC1P18887 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.76□□□□□ -1.49
XRCC1P18887 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.76□□□□□ -1.49
XRCC1P18887 uc_338.26-201ENST00000612659 160 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 AL357153.4-201ENST00000620487 1016 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 AC127024.6-201ENST00000621598 424 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 PARP4P2-201ENST00000446672 3326 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 AC016745.2-201ENST00000608834 3443 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 AC015689.2-201ENST00000528172 1738 ntBASIC5.76□□□□□ -1.49
XRCC1P18887 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
XRCC1P18887 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
XRCC1P18887 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
XRCC1P18887 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms