Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 MIR188-201ENST00000385034 86 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PTPN1P18031 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 AC119751.3-201ENST00000399720 670 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.75□□□□□ -1.33
PTPN1P18031 RPL24P2-201ENST00000421023 475 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 AC094019.1-201ENST00000434678 472 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.75□□□□□ -1.33
PTPN1P18031 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.75□□□□□ -1.33
PTPN1P18031 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.75□□□□□ -1.33
PTPN1P18031 RAB28P3-201ENST00000448325 597 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 VN1R38P-201ENST00000450265 887 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 OR52E7P-201ENST00000452394 933 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 RPL5P12-201ENST00000477071 851 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 RN7SL369P-201ENST00000477138 299 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.75□□□□□ -1.33
PTPN1P18031 KHDC1P1-201ENST00000511053 508 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 ZNF519P4-201ENST00000514008 125 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 RNA5SP473-201ENST00000516402 125 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.75□□□□□ -1.33
PTPN1P18031 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 AC009729.1-201ENST00000548873 1133 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 AL121579.2-201ENST00000555466 590 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 AC104229.1-201ENST00000561364 255 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 AC018558.5-201ENST00000565840 952 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.75□□□□□ -1.33
PTPN1P18031 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 MIR3154-201ENST00000577829 84 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.75□□□□□ -1.33
PTPN1P18031 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.75□□□□□ -1.33
PTPN1P18031 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC6.75□□□□□ -1.33
PTPN1P18031 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.75□□□□□ -1.33
PTPN1P18031 AC073387.2-201ENST00000604797 784 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.75□□□□□ -1.33
PTPN1P18031 AL008723.3-201ENST00000608926 449 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.75□□□□□ -1.33
PTPN1P18031 MIR6806-201ENST00000622141 64 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 AC012254.5-201ENST00000623573 478 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.75□□□□□ -1.33
PTPN1P18031 AL683826.1-201ENST00000624104 627 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.75□□□□□ -1.33
PTPN1P18031 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.75□□□□□ -1.33
PTPN1P18031 AP001153.1-201ENST00000641024 338 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
PTPN1P18031 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.75□□□□□ -1.33
PTPN1P18031 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.75□□□□□ -1.33
PTPN1P18031 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
PTPN1P18031 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PTPN1P18031 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.75□□□□□ -1.33
PTPN1P18031 AL359976.1-201ENST00000418655 3528 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 AC008432.1-201ENST00000615912 1320 ntBASIC6.75□□□□□ -1.33
PTPN1P18031 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN1P18031 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
PTPN1P18031 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.74□□□□□ -1.33
PTPN1P18031 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN1P18031 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN1P18031 AL359715.3-201ENST00000569267 2123 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 AC022905.1-201ENST00000503430 3048 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN1P18031 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.74□□□□□ -1.33
PTPN1P18031 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN1P18031 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN1P18031 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PTPN1P18031 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN1P18031 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN1P18031 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PTPN1P18031 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN1P18031 RNFT1P3-201ENST00000340898 1052 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 MIR513B-201ENST00000385136 84 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 YWHAZP6-201ENST00000399764 738 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 AL139805.1-201ENST00000407837 289 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 MIR1275-201ENST00000408770 80 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 U3.43-201ENST00000410734 213 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 RN7SKP97-201ENST00000410966 333 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 RNU2-18P-201ENST00000411224 162 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.74□□□□□ -1.33
PTPN1P18031 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.74□□□□□ -1.33
PTPN1P18031 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.74□□□□□ -1.33
PTPN1P18031 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
PTPN1P18031 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.74□□□□□ -1.33
PTPN1P18031 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.74□□□□□ -1.33
PTPN1P18031 USP9YP11-201ENST00000427537 717 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 AC093422.3-201ENST00000428506 305 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.74□□□□□ -1.33
PTPN1P18031 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.74□□□□□ -1.33
PTPN1P18031 RPL34P27-201ENST00000428810 349 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 UBE2V1P1-201ENST00000430836 445 ntBASIC6.74□□□□□ -1.33
PTPN1P18031 AC112492.2-201ENST00000432774 1030 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms