Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.42□□□□□ -1.38
MMP3P08254 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
MMP3P08254 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
MMP3P08254 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
MMP3P08254 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
MMP3P08254 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.42□□□□□ -1.38
MMP3P08254 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
MMP3P08254 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MMP3P08254 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MMP3P08254 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MMP3P08254 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MMP3P08254 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
MMP3P08254 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.42□□□□□ -1.38
MMP3P08254 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MMP3P08254 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.41□□□□□ -1.38
MMP3P08254 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
MMP3P08254 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MMP3P08254 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MMP3P08254 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
MMP3P08254 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
MMP3P08254 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MMP3P08254 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MMP3P08254 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MMP3P08254 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
MMP3P08254 OR5T3-201ENST00000303059 1023 ntBASIC6.41□□□□□ -1.38
MMP3P08254 U3.7-201ENST00000363668 216 ntBASIC6.41□□□□□ -1.38
MMP3P08254 NIFKP3-201ENST00000417799 865 ntBASIC6.41□□□□□ -1.38
MMP3P08254 NENFP1-201ENST00000419476 466 ntBASIC6.41□□□□□ -1.38
MMP3P08254 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.41□□□□□ -1.38
MMP3P08254 AL627308.1-201ENST00000435693 821 ntBASIC6.41□□□□□ -1.38
MMP3P08254 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.41□□□□□ -1.38
MMP3P08254 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
MMP3P08254 AC089999.1-201ENST00000460336 374 ntBASIC6.41□□□□□ -1.38
MMP3P08254 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MMP3P08254 AC008410.1-201ENST00000483777 339 ntBASIC6.41□□□□□ -1.38
MMP3P08254 AC113398.2-201ENST00000507630 558 ntBASIC6.41□□□□□ -1.38
MMP3P08254 AC074255.1-201ENST00000511259 501 ntBASIC6.41□□□□□ -1.38
MMP3P08254 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.41□□□□□ -1.38
MMP3P08254 SNORD116-30-201ENST00000516468 85 ntBASIC6.41□□□□□ -1.38
MMP3P08254 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.41□□□□□ -1.38
MMP3P08254 AC015720.2-201ENST00000567709 334 ntBASIC6.41□□□□□ -1.38
MMP3P08254 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.41□□□□□ -1.38
MMP3P08254 PRELID3BP3-201ENST00000584963 545 ntBASIC6.41□□□□□ -1.38
MMP3P08254 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.41□□□□□ -1.38
MMP3P08254 AL683813.2-201ENST00000605245 502 ntBASIC6.41□□□□□ -1.38
MMP3P08254 AC012467.1-201ENST00000607740 256 ntBASIC6.41□□□□□ -1.38
MMP3P08254 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.41□□□□□ -1.38
MMP3P08254 AL137246.2-201ENST00000613439 662 ntBASIC6.41□□□□□ -1.38
MMP3P08254 AL109620.1-201ENST00000618738 1197 ntBASIC6.41□□□□□ -1.38
MMP3P08254 AP001885.1-201ENST00000621658 558 ntBASIC6.41□□□□□ -1.38
MMP3P08254 MIR8080-201ENST00000622224 89 ntBASIC6.41□□□□□ -1.38
MMP3P08254 AC018445.2-201ENST00000622987 260 ntBASIC6.41□□□□□ -1.38
MMP3P08254 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.41□□□□□ -1.38
MMP3P08254 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
MMP3P08254 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
MMP3P08254 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MMP3P08254 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MMP3P08254 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.41□□□□□ -1.38
MMP3P08254 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MMP3P08254 AC005034.3-201ENST00000604845 1747 ntBASIC6.41□□□□□ -1.38
MMP3P08254 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.41□□□□□ -1.38
MMP3P08254 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MMP3P08254 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.41□□□□□ -1.38
MMP3P08254 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.41□□□□□ -1.38
MMP3P08254 AC079753.1-201ENST00000623243 3868 ntBASIC6.41□□□□□ -1.38
MMP3P08254 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.41□□□□□ -1.38
MMP3P08254 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.4□□□□□ -1.38
MMP3P08254 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.4□□□□□ -1.38
MMP3P08254 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
MMP3P08254 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.4□□□□□ -1.38
MMP3P08254 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
MMP3P08254 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.4□□□□□ -1.38
MMP3P08254 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
MMP3P08254 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
MMP3P08254 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
MMP3P08254 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
MMP3P08254 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
MMP3P08254 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
MMP3P08254 GAPDHP24-201ENST00000328713 983 ntBASIC6.4□□□□□ -1.38
MMP3P08254 RNA5SP30-201ENST00000365552 115 ntBASIC6.4□□□□□ -1.38
MMP3P08254 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
MMP3P08254 MIR937-201ENST00000401271 86 ntBASIC6.4□□□□□ -1.38
MMP3P08254 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.4□□□□□ -1.38
MMP3P08254 DPPA2P3-201ENST00000411853 655 ntBASIC6.4□□□□□ -1.38
MMP3P08254 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.4□□□□□ -1.38
MMP3P08254 AP000534.2-201ENST00000412729 568 ntBASIC6.4□□□□□ -1.38
MMP3P08254 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.4□□□□□ -1.38
MMP3P08254 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.4□□□□□ -1.38
MMP3P08254 RANP7-201ENST00000418085 644 ntBASIC6.4□□□□□ -1.38
MMP3P08254 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.4□□□□□ -1.38
MMP3P08254 MTND2P11-201ENST00000423638 648 ntBASIC6.4□□□□□ -1.38
MMP3P08254 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.4□□□□□ -1.38
MMP3P08254 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.4□□□□□ -1.38
MMP3P08254 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.4□□□□□ -1.38
MMP3P08254 RNU1-88P-201ENST00000459274 128 ntBASIC6.4□□□□□ -1.38
MMP3P08254 RPL5P12-201ENST00000477071 851 ntBASIC6.4□□□□□ -1.38
MMP3P08254 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.4□□□□□ -1.38
MMP3P08254 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
MMP3P08254 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.4□□□□□ -1.38
MMP3P08254 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms