Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.32□□□□□ -1.4
RB1P06400 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 DOCK11P1-201ENST00000553480 5932 ntBASIC6.32□□□□□ -1.4
RB1P06400 AC079753.1-201ENST00000623243 3868 ntBASIC6.32□□□□□ -1.4
RB1P06400 C4BPAP1-201ENST00000415474 1893 ntBASIC6.32□□□□□ -1.4
RB1P06400 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RB1P06400 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.32□□□□□ -1.4
RB1P06400 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RB1P06400 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RB1P06400 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RB1P06400 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RB1P06400 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RB1P06400 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RB1P06400 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RB1P06400 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.31□□□□□ -1.4
RB1P06400 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RB1P06400 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RB1P06400 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.31□□□□□ -1.4
RB1P06400 Y_RNA.62-201ENST00000362840 99 ntBASIC6.31□□□□□ -1.4
RB1P06400 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RB1P06400 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RB1P06400 NACAP7-201ENST00000407371 609 ntBASIC6.31□□□□□ -1.4
RB1P06400 RN7SKP29-201ENST00000410957 272 ntBASIC6.31□□□□□ -1.4
RB1P06400 AL353626.3-201ENST00000413399 657 ntBASIC6.31□□□□□ -1.4
RB1P06400 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.31□□□□□ -1.4
RB1P06400 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RB1P06400 AL451136.1-201ENST00000435399 325 ntBASIC6.31□□□□□ -1.4
RB1P06400 PTMAP6-201ENST00000439110 327 ntBASIC6.31□□□□□ -1.4
RB1P06400 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.31□□□□□ -1.4
RB1P06400 SEPT7P6-201ENST00000469999 1143 ntBASIC6.31□□□□□ -1.4
RB1P06400 RN7SL727P-201ENST00000482164 296 ntBASIC6.31□□□□□ -1.4
RB1P06400 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.31□□□□□ -1.4
RB1P06400 AC098799.1-201ENST00000504752 800 ntBASIC6.31□□□□□ -1.4
RB1P06400 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.31□□□□□ -1.4
RB1P06400 NRBF2P4-201ENST00000520874 850 ntBASIC6.31□□□□□ -1.4
RB1P06400 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.31□□□□□ -1.4
RB1P06400 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.31□□□□□ -1.4
RB1P06400 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.31□□□□□ -1.4
RB1P06400 MTND2P17-201ENST00000550281 688 ntBASIC6.31□□□□□ -1.4
RB1P06400 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.31□□□□□ -1.4
RB1P06400 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.31□□□□□ -1.4
RB1P06400 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.31□□□□□ -1.4
RB1P06400 AC067852.5-201ENST00000589299 310 ntBASIC6.31□□□□□ -1.4
RB1P06400 AC091193.1-201ENST00000604640 448 ntBASIC6.31□□□□□ -1.4
RB1P06400 MIR6837-201ENST00000620884 64 ntBASIC6.31□□□□□ -1.4
RB1P06400 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RB1P06400 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.31□□□□□ -1.4
RB1P06400 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.31□□□□□ -1.4
RB1P06400 AC022726.2-201ENST00000634673 547 ntBASIC6.31□□□□□ -1.4
RB1P06400 AC003992.1-201ENST00000635364 557 ntBASIC6.31□□□□□ -1.4
RB1P06400 CASC19-264ENST00000641912 1184 ntBASIC6.31□□□□□ -1.4
RB1P06400 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.31□□□□□ -1.4
RB1P06400 ICE2P1-201ENST00000512800 1849 ntBASIC6.31□□□□□ -1.4
RB1P06400 AC110373.1-201ENST00000505994 3505 ntBASIC6.31□□□□□ -1.4
RB1P06400 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
RB1P06400 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RB1P06400 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
RB1P06400 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RB1P06400 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.31□□□□□ -1.4
RB1P06400 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RB1P06400 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.31□□□□□ -1.4
RB1P06400 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.31□□□□□ -1.4
RB1P06400 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RB1P06400 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.3□□□□□ -1.4
RB1P06400 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.3□□□□□ -1.4
RB1P06400 AC011815.2-201ENST00000618230 2021 ntBASIC6.3□□□□□ -1.4
RB1P06400 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.3□□□□□ -1.4
RB1P06400 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RB1P06400 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.3□□□□□ -1.4
RB1P06400 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RB1P06400 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.3□□□□□ -1.4
RB1P06400 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.3□□□□□ -1.4
RB1P06400 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RB1P06400 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.3□□□□□ -1.4
RB1P06400 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RB1P06400 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RB1P06400 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RB1P06400 RNU6-171P-201ENST00000384354 107 ntBASIC6.3□□□□□ -1.4
RB1P06400 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.3□□□□□ -1.4
RB1P06400 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.3□□□□□ -1.4
RB1P06400 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.3□□□□□ -1.4
RB1P06400 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.3□□□□□ -1.4
RB1P06400 RPS4XP5-201ENST00000419038 768 ntBASIC6.3□□□□□ -1.4
RB1P06400 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.3□□□□□ -1.4
RB1P06400 AC012075.1-201ENST00000436549 580 ntBASIC6.3□□□□□ -1.4
RB1P06400 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.3□□□□□ -1.4
RB1P06400 RN7SL72P-201ENST00000460697 269 ntBASIC6.3□□□□□ -1.4
RB1P06400 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.3□□□□□ -1.4
RB1P06400 AGGF1P3-201ENST00000493675 1213 ntBASIC6.3□□□□□ -1.4
RB1P06400 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.3□□□□□ -1.4
RB1P06400 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.3□□□□□ -1.4
RB1P06400 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.3□□□□□ -1.4
RB1P06400 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.3□□□□□ -1.4
RB1P06400 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.3□□□□□ -1.4
RB1P06400 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.3□□□□□ -1.4
RB1P06400 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms