Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 RNA5SP487-201ENST00000410186 122 ntBASIC3.36□□□□□ -1.87
APOBP04114 AC007559.1-201ENST00000428736 355 ntBASIC3.36□□□□□ -1.87
APOBP04114 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.36□□□□□ -1.87
APOBP04114 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC3.36□□□□□ -1.87
APOBP04114 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC3.36□□□□□ -1.87
APOBP04114 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.36□□□□□ -1.87
APOBP04114 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.36□□□□□ -1.87
APOBP04114 AC099654.6-201ENST00000636487 512 ntBASIC3.36□□□□□ -1.87
APOBP04114 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
APOBP04114 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
APOBP04114 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC3.36□□□□□ -1.87
APOBP04114 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 RN7SKP149-201ENST00000363008 344 ntBASIC3.36□□□□□ -1.87
APOBP04114 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC3.36□□□□□ -1.87
APOBP04114 AC022034.3-201ENST00000471393 478 ntBASIC3.36□□□□□ -1.87
APOBP04114 AC074255.1-201ENST00000511259 501 ntBASIC3.36□□□□□ -1.87
APOBP04114 MTND6P2-201ENST00000512226 524 ntBASIC3.36□□□□□ -1.87
APOBP04114 CYP4F27P-201ENST00000514557 494 ntBASIC3.36□□□□□ -1.87
APOBP04114 RN7SKP253-201ENST00000516424 309 ntBASIC3.36□□□□□ -1.87
APOBP04114 RN7SKP92-201ENST00000517266 244 ntBASIC3.36□□□□□ -1.87
APOBP04114 AC068831.4-201ENST00000556118 109 ntBASIC3.36□□□□□ -1.87
APOBP04114 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.36□□□□□ -1.87
APOBP04114 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC3.36□□□□□ -1.87
APOBP04114 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 AL020997.2-201ENST00000602607 184 ntBASIC3.36□□□□□ -1.87
APOBP04114 AC013731.1-201ENST00000604340 883 ntBASIC3.36□□□□□ -1.87
APOBP04114 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
APOBP04114 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
APOBP04114 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
APOBP04114 AL449283.1-201ENST00000602631 3403 ntBASIC3.36□□□□□ -1.87
APOBP04114 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC3.36□□□□□ -1.87
APOBP04114 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC3.36□□□□□ -1.87
APOBP04114 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC3.36□□□□□ -1.87
APOBP04114 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC3.36□□□□□ -1.87
APOBP04114 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC3.36□□□□□ -1.87
APOBP04114 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 FAM96AP1-201ENST00000430879 482 ntBASIC3.36□□□□□ -1.87
APOBP04114 RPL12P39-201ENST00000455456 496 ntBASIC3.36□□□□□ -1.87
APOBP04114 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.36□□□□□ -1.87
APOBP04114 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.36□□□□□ -1.87
APOBP04114 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC3.36□□□□□ -1.87
APOBP04114 SCARNA9-201ENST00000530422 353 ntBASIC3.36□□□□□ -1.87
APOBP04114 AC090424.1-201ENST00000535243 736 ntBASIC3.36□□□□□ -1.87
APOBP04114 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.36□□□□□ -1.87
APOBP04114 AC004158.1-201ENST00000564508 4319 ntBASIC3.36□□□□□ -1.87
APOBP04114 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC3.36□□□□□ -1.87
APOBP04114 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 AC006511.3-201ENST00000624929 1783 ntBASIC3.36□□□□□ -1.87
APOBP04114 IQCB2P-201ENST00000401788 1633 ntBASIC3.36□□□□□ -1.87
APOBP04114 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC3.36□□□□□ -1.87
APOBP04114 AL591848.1-201ENST00000413092 322 ntBASIC3.36□□□□□ -1.87
APOBP04114 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.36□□□□□ -1.87
APOBP04114 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC3.36□□□□□ -1.87
APOBP04114 AC005154.2-201ENST00000438110 379 ntBASIC3.36□□□□□ -1.87
APOBP04114 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APOBP04114 DHFRP1-201ENST00000579682 559 ntBASIC3.36□□□□□ -1.87
APOBP04114 AC095055.1-201ENST00000603472 1113 ntBASIC3.36□□□□□ -1.87
APOBP04114 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.36□□□□□ -1.87
APOBP04114 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.36□□□□□ -1.87
APOBP04114 OR7E25P-202ENST00000641088 5937 ntBASIC3.35□□□□□ -1.87
APOBP04114 TNC-210ENST00000535648 7508 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBP04114 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBP04114 U3.3-201ENST00000362986 216 ntBASIC3.35□□□□□ -1.87
APOBP04114 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBP04114 CENPIP1-201ENST00000425713 902 ntBASIC3.35□□□□□ -1.87
APOBP04114 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.35□□□□□ -1.87
APOBP04114 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.35□□□□□ -1.87
APOBP04114 BNIP3P22-201ENST00000593399 556 ntBASIC3.35□□□□□ -1.87
APOBP04114 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBP04114 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms