Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 AC123769.2-201ENST00000624332 5984 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 RPL21P132-201ENST00000331267 462 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 RN7SKP211-201ENST00000363328 315 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
PDGFAP04085 Y_RNA.582-201ENST00000391023 95 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 RNU6-1300P-201ENST00000391046 108 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 RPL17P50-201ENST00000396131 546 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 AC002524.1-201ENST00000411687 547 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC7.11□□□□□ -1.27
PDGFAP04085 GLRXP1-201ENST00000423261 334 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 AKR1B10P1-201ENST00000425765 942 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 UBE2FP3-201ENST00000436366 524 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 AL137074.1-201ENST00000442640 465 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 BX005266.3-201ENST00000443013 1075 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC7.11□□□□□ -1.27
PDGFAP04085 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC7.11□□□□□ -1.27
PDGFAP04085 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 CBX5P1-201ENST00000468470 561 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AC022730.1-201ENST00000473114 568 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.11□□□□□ -1.27
PDGFAP04085 ST13P12-201ENST00000508958 1094 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.11□□□□□ -1.27
PDGFAP04085 AC074344.1-201ENST00000512823 224 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC7.11□□□□□ -1.27
PDGFAP04085 RNU6-314P-201ENST00000516574 104 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AP005902.2-201ENST00000518393 307 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.11□□□□□ -1.27
PDGFAP04085 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 POLR2KP1-201ENST00000553226 168 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.11□□□□□ -1.27
PDGFAP04085 DPPA3P2-202ENST00000557188 1219 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.11□□□□□ -1.27
PDGFAP04085 AC090607.2-201ENST00000560331 695 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC7.11□□□□□ -1.27
PDGFAP04085 LINC00556-201ENST00000569603 412 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.11□□□□□ -1.27
PDGFAP04085 MIR1273F-201ENST00000580581 99 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AC006116.6-201ENST00000593258 1103 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 OR5AH1P-201ENST00000595968 283 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.11□□□□□ -1.27
PDGFAP04085 BNIP3P33-201ENST00000598912 569 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AP001554.1-201ENST00000604533 376 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AC010857.1-201ENST00000606398 594 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AC012510.1-201ENST00000607946 759 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.11□□□□□ -1.27
PDGFAP04085 MIR8082-201ENST00000612488 81 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 AC010653.3-201ENST00000635332 232 ntBASIC7.11□□□□□ -1.27
PDGFAP04085 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.11□□□□□ -1.27
PDGFAP04085 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PDGFAP04085 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
PDGFAP04085 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.11□□□□□ -1.27
PDGFAP04085 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.11□□□□□ -1.27
PDGFAP04085 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.11□□□□□ -1.27
PDGFAP04085 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDGFAP04085 AC135352.1-201ENST00000506173 1418 ntBASIC7.1□□□□□ -1.27
PDGFAP04085 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDGFAP04085 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
PDGFAP04085 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
PDGFAP04085 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDGFAP04085 CASC19-260ENST00000641828 2001 ntBASIC7.1□□□□□ -1.27
PDGFAP04085 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDGFAP04085 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.1□□□□□ -1.27
PDGFAP04085 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.1□□□□□ -1.27
PDGFAP04085 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDGFAP04085 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDGFAP04085 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
PDGFAP04085 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDGFAP04085 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDGFAP04085 RNU6-761P-201ENST00000384148 107 ntBASIC7.1□□□□□ -1.27
PDGFAP04085 MIR217-201ENST00000384817 110 ntBASIC7.1□□□□□ -1.27
PDGFAP04085 PTMAP8-201ENST00000397729 342 ntBASIC7.1□□□□□ -1.27
PDGFAP04085 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
PDGFAP04085 RN7SKP263-201ENST00000411194 309 ntBASIC7.1□□□□□ -1.27
PDGFAP04085 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC7.1□□□□□ -1.27
PDGFAP04085 AC231533.2-201ENST00000419045 978 ntBASIC7.1□□□□□ -1.27
PDGFAP04085 OR8F1P-201ENST00000425243 930 ntBASIC7.1□□□□□ -1.27
PDGFAP04085 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms