Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TRIM38O00635 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.24□□□□□ -1.41
TRIM38O00635 RN7SKP34-201ENST00000516142 244 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM38O00635 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM38O00635 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM38O00635 AC079905.1-201ENST00000549280 475 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM38O00635 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM38O00635 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM38O00635 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.24□□□□□ -1.41
TRIM38O00635 AP005136.2-201ENST00000583253 1049 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM38O00635 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM38O00635 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM38O00635 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM38O00635 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM38O00635 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM38O00635 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM38O00635 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM38O00635 AL356608.1-201ENST00000610034 820 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM38O00635 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
TRIM38O00635 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM38O00635 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM38O00635 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM38O00635 SAGE3P-201ENST00000619800 1635 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM38O00635 SHQ1P1-201ENST00000437111 1544 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM38O00635 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM38O00635 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM38O00635 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM38O00635 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM38O00635 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM38O00635 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM38O00635 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM38O00635 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM38O00635 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM38O00635 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM38O00635 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM38O00635 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM38O00635 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM38O00635 RNA5SP110-201ENST00000362638 115 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 RNU6-609P-201ENST00000365459 107 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 HMGN1P20-201ENST00000411849 300 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM38O00635 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM38O00635 AL157884.1-201ENST00000424561 454 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 PRUNEP1-201ENST00000425846 705 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM38O00635 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM38O00635 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM38O00635 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM38O00635 AC239798.3-201ENST00000454459 408 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 AL133351.3-201ENST00000454998 193 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 SETP20-201ENST00000457046 852 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 RN7SL643P-201ENST00000471845 291 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM38O00635 AC104109.1-201ENST00000498563 436 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 HMGB1P3-201ENST00000502802 616 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 PSMA2P2-201ENST00000504319 686 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM38O00635 AC091965.3-201ENST00000506236 208 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 AC006499.4-201ENST00000510947 694 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 AC103833.1-201ENST00000517442 172 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 HMGB1P46-201ENST00000520062 610 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.23□□□□□ -1.41
TRIM38O00635 AL121579.2-201ENST00000555466 590 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 HNRNPCP1-201ENST00000556181 766 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM38O00635 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.23□□□□□ -1.41
TRIM38O00635 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
TRIM38O00635 MIR3614-201ENST00000581261 86 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 BMS1P7-201ENST00000602440 1052 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 AC015849.2-201ENST00000605738 409 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 AL450270.1-201ENST00000606160 391 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 SNORA74.4-201ENST00000607595 199 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.23□□□□□ -1.41
TRIM38O00635 AL159169.2-201ENST00000610061 1269 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 AC024255.1-201ENST00000614376 102 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM38O00635 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 AL445493.3-201ENST00000619568 477 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 AC024884.1-201ENST00000620583 399 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 AL132640.3-201ENST00000630473 177 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms