Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.93□□□□□ -1.3
CCDC66A2RUB6 AL121936.2-201ENST00000641935 662 ntBASIC6.93□□□□□ -1.3
CCDC66A2RUB6 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC66A2RUB6 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC66A2RUB6 AC008432.1-201ENST00000615912 1320 ntBASIC6.93□□□□□ -1.3
CCDC66A2RUB6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC66A2RUB6 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC66A2RUB6 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC66A2RUB6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC66A2RUB6 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC66A2RUB6 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC66A2RUB6 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC022325.1-201ENST00000502748 2199 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC010266.2-201ENST00000564741 3255 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 RNU6-1251P-201ENST00000364502 107 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 UBBP1-201ENST00000392399 473 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 LDHAP5-201ENST00000394996 622 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 RPL5P19-201ENST00000404228 893 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 BX119904.1-201ENST00000432026 348 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 RPL6P30-201ENST00000443382 862 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AL358794.1-201ENST00000445689 381 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 Z99714.1-201ENST00000450463 807 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 RPL26P30-201ENST00000453533 435 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 RPL23AP64-201ENST00000469465 435 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 RPS16P9-201ENST00000477220 427 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 RPL21P42-201ENST00000488408 464 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 RN7SL284P-201ENST00000498823 275 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC010374.1-201ENST00000503762 1237 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC021087.2-201ENST00000504656 1203 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 OR52H2P-201ENST00000514607 902 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 SETP17-201ENST00000534163 817 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 OR4U1P-201ENST00000554958 912 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC104229.1-201ENST00000561364 255 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC040904.1-201ENST00000590850 223 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AL049840.5-201ENST00000602827 552 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 AC011330.2-201ENST00000621680 635 ntBASIC6.92□□□□□ -1.3
CCDC66A2RUB6 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC66A2RUB6 GUCY1B2-204ENST00000531898 1979 ntBASIC6.91□□□□□ -1.3
CCDC66A2RUB6 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC66A2RUB6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC66A2RUB6 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC66A2RUB6 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC66A2RUB6 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC66A2RUB6 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC66A2RUB6 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC66A2RUB6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC66A2RUB6 CDY11P-201ENST00000447168 1651 ntBASIC6.91□□□□□ -1.3
CCDC66A2RUB6 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC66A2RUB6 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC66A2RUB6 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC66A2RUB6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC66A2RUB6 AC126474.2-201ENST00000623268 1750 ntBASIC6.91□□□□□ -1.3
CCDC66A2RUB6 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC66A2RUB6 MIR138-2-201ENST00000384916 84 ntBASIC6.91□□□□□ -1.3
CCDC66A2RUB6 ZNF37CP-201ENST00000406795 241 ntBASIC6.91□□□□□ -1.3
CCDC66A2RUB6 AL451061.1-201ENST00000407887 862 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms