Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC015983.1-201ENST00000441577 373 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 OR52I1-201ENST00000450052 1050 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 HMGB1P7-201ENST00000450921 612 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC108157.1-201ENST00000510511 539 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 HMGN1P15-201ENST00000513870 295 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 SEC11B-201ENST00000518383 499 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC091078.2-201ENST00000557145 559 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 DPPA3P2-202ENST00000557188 1219 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 ARGFXP2-201ENST00000579304 949 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 BNIP3P27-201ENST00000599991 412 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC124916.2-201ENST00000604416 224 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC145423.1-201ENST00000605712 336 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC005828.7-201ENST00000607331 556 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC074276.2-201ENST00000619891 348 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC232271.1-201ENST00000602455 2715 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC123769.1-201ENST00000530992 3192 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 RNFT1P3-201ENST00000340898 1052 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 RN7SKP250-201ENST00000363924 321 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC019205.1-201ENST00000421830 730 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC073508.1-201ENST00000428866 656 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC023141.8-201ENST00000442554 208 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC007383.1-201ENST00000445875 636 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC073476.1-201ENST00000452854 407 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 RN7SL254P-201ENST00000460609 284 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 EIF2S2P4-201ENST00000461070 984 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 RN7SL568P-201ENST00000493069 298 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 OR4A41P-201ENST00000533053 928 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC027176.2-201ENST00000559166 746 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC011458.1-201ENST00000604034 617 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AL139022.2-201ENST00000606934 443 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC079776.5-201ENST00000641920 211 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AL592494.2-201ENST00000425455 1548 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 AC104964.3-201ENST00000606115 2860 ntBASIC5.92□□□□□ -1.46
TCRBV7S3A2A0A539 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AL158152.1-201ENST00000602652 1435 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms