Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.26□□□□□ -1.57
TRBV4-1A0A0J9YWV2 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.26□□□□□ -1.57
TRBV4-1A0A0J9YWV2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.26□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TRBV4-1A0A0J9YWV2 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL132656.3-201ENST00000606384 1595 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL034546.1-201ENST00000623740 3693 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 HSPD1P7-201ENST00000447985 1686 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC016739.1-201ENST00000405359 345 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL354890.1-201ENST00000413730 346 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC019205.1-201ENST00000421830 730 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RPSAP32-201ENST00000432681 526 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 Z85994.2-201ENST00000434327 452 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 OR52I1-201ENST00000450052 1050 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC093166.4-201ENST00000457867 318 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 SNRPCP3-201ENST00000474888 476 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 SNRPCP11-201ENST00000492453 205 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AP001000.1-201ENST00000526843 742 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 HMGN2P47-201ENST00000559378 272 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 MIR6809-201ENST00000612189 116 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC004801.6-201ENST00000616571 978 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC104820.1-201ENST00000624183 307 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 CUL4AP1-201ENST00000514750 1863 ntBASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 OR5T3-201ENST00000303059 1023 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 MIR133A2-201ENST00000347538 102 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC005042.1-201ENST00000393397 800 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RN7SKP29-201ENST00000410957 272 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL133482.1-201ENST00000415988 498 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RPL12P43-201ENST00000420608 499 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RPS19P6-201ENST00000441327 433 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 OR52A4P-202ENST00000481634 799 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RPS27P20-201ENST00000492051 246 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 IGLV3-30-201ENST00000524362 298 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms