Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 NR1I3-205ENST00000367983 1473 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 SAMMSON-210ENST00000641260 1308 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 RN7SKP239-201ENST00000364814 295 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 HEATR5A-201ENST00000382464 507 ntTSL 2 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 Y_RNA.455-201ENST00000384230 98 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 AL591416.1-201ENST00000404015 867 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 RPL31P52-201ENST00000407532 367 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 MIR548F5-201ENST00000408421 86 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 CNOT4P1-201ENST00000417432 1199 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 RPL21P110-201ENST00000433345 446 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 ERLEC1P1-201ENST00000433806 578 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 SDHDP2-201ENST00000436937 465 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 AC092809.1-201ENST00000441469 474 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 AC069213.3-201ENST00000454858 474 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 RPL30P15-201ENST00000457129 321 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 MIR2053-201ENST00000459295 91 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 RPS10P16-201ENST00000483812 496 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 AC022868.1-201ENST00000517767 391 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 AC022882.1-201ENST00000532142 501 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 AC025165.2-201ENST00000549477 699 ntTSL 3 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 COX5AP2-201ENST00000554418 394 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 AC010650.1-201ENST00000567559 494 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 AC008622.1-201ENST00000597106 284 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 ANKMY2-205ENST00000627859 210 ntTSL 5 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 GLDCP1-201ENST00000510885 2678 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 FRMD7-201ENST00000298542 3198 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 ACTR3BP2-202ENST00000623630 1338 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 MTCP1-201ENST00000362018 570 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 RNA5SP145-201ENST00000363124 125 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 CNN2P7-201ENST00000400583 932 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 RN7SKP266-201ENST00000410232 287 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 MYL6BP1-201ENST00000429485 615 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 RPS15AP9-201ENST00000439856 381 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AC242426.2-201ENST00000446956 795 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 RPL7P15-201ENST00000461190 712 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 PA2G4P4-201ENST00000473864 1182 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 RN7SL448P-201ENST00000475566 295 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 OR52H2P-201ENST00000514607 902 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 Y_RNA.682-201ENST00000516457 100 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 Metazoa_SRP.11-201ENST00000537819 269 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AP002373.2-201ENST00000541631 1060 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AC099489.2-201ENST00000574976 260 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 RN7SL670P-201ENST00000577235 294 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AC004908.1-201ENST00000606572 541 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AC020634.1-201ENST00000608701 549 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AC007485.1-201ENST00000616755 206 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 uc_338.11-201ENST00000619132 160 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 AL121594.6-201ENST00000633440 261 ntBASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC9.42□□□□□ -0.9
PCDHB13Q9Y5F0 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms