Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AL663074.2-201ENST00000440621 479 ntBASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 UBE2V2P4-201ENST00000447495 259 ntBASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AC093719.1-201ENST00000480427 441 ntBASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AC106872.4-201ENST00000510050 523 ntBASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 LDHBP3-201ENST00000514909 822 ntBASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AC020978.7-201ENST00000575953 1187 ntBASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AC015802.2-201ENST00000589690 189 ntBASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AC125494.2-201ENST00000602431 657 ntBASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AL139099.4-201ENST00000614802 114 ntBASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AL449283.1-201ENST00000602631 3403 ntBASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 OR13C1P-202ENST00000641378 2919 ntBASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 AC138907.8-201ENST00000623981 2256 ntBASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 XKRY2-202ENST00000623874 1581 ntBASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 XKRY-202ENST00000624960 1581 ntBASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 YWHAEP1-201ENST00000453697 763 ntBASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 PFN1P6-201ENST00000476786 399 ntBASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 OR4A42P-201ENST00000531397 938 ntBASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 AP001496.3-201ENST00000580230 913 ntBASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CLIP2Q9UDT6 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 NLRP3P1-201ENST00000622303 1785 ntBASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 AC232271.1-201ENST00000602455 2715 ntBASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 RNA5SP242-201ENST00000364171 118 ntBASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 AC093155.2-201ENST00000420734 937 ntBASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 DEFA9P-201ENST00000433042 285 ntBASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 AC023141.8-201ENST00000442554 208 ntBASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 AP000281.1-201ENST00000444036 316 ntBASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 AL603882.1-201ENST00000463059 681 ntBASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 RN7SL717P-201ENST00000478343 297 ntBASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 AC011411.1-201ENST00000509592 876 ntBASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 RN7SKP288-201ENST00000516227 268 ntBASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 CYCSP22-201ENST00000517555 339 ntBASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 GTF2IP4-201ENST00000453092 2054 ntBASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLIP2Q9UDT6 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms