Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC8.47□□□□□ -1.05
USP35Q9P2H5 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC8.47□□□□□ -1.05
USP35Q9P2H5 RN7SL515P-201ENST00000463999 297 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 HMGB1P3-201ENST00000502802 616 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 ATP5LP3-201ENST00000514223 304 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC8.47□□□□□ -1.05
USP35Q9P2H5 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.47□□□□□ -1.05
USP35Q9P2H5 AL591767.3-201ENST00000554632 525 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 AC007225.2-201ENST00000562529 256 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 MIR3176-201ENST00000582210 90 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 AC005332.4-201ENST00000592752 579 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC8.47□□□□□ -1.05
USP35Q9P2H5 BNIP3P32-201ENST00000600015 554 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 AC098483.2-201ENST00000603158 454 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 PPATP2-201ENST00000605635 508 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 AC091768.1-201ENST00000609258 930 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 AC084824.5-201ENST00000612009 413 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 AC245014.3-201ENST00000618589 347 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 AL158062.1-201ENST00000619632 745 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC8.47□□□□□ -1.05
USP35Q9P2H5 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC8.47□□□□□ -1.05
USP35Q9P2H5 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
USP35Q9P2H5 SAMMSON-210ENST00000641260 1308 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC8.47□□□□□ -1.05
USP35Q9P2H5 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
USP35Q9P2H5 TNPO1P2-201ENST00000426249 2665 ntBASIC8.47□□□□□ -1.05
USP35Q9P2H5 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
USP35Q9P2H5 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
USP35Q9P2H5 RBPJP7-201ENST00000442803 1447 ntBASIC8.46□□□□□ -1.05
USP35Q9P2H5 RBPJP5-201ENST00000449433 1447 ntBASIC8.46□□□□□ -1.05
USP35Q9P2H5 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
USP35Q9P2H5 Z95114.1-201ENST00000624264 14574 ntBASIC8.46□□□□□ -1.05
USP35Q9P2H5 AC006511.3-201ENST00000624929 1783 ntBASIC8.46□□□□□ -1.05
USP35Q9P2H5 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
USP35Q9P2H5 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
USP35Q9P2H5 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
USP35Q9P2H5 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
USP35Q9P2H5 SNORD16-201ENST00000362803 99 ntBASIC8.46□□□□□ -1.06
USP35Q9P2H5 RNU1-134P-201ENST00000362935 165 ntBASIC8.46□□□□□ -1.06
USP35Q9P2H5 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
USP35Q9P2H5 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 AC245884.2-201ENST00000426257 404 ntBASIC8.46□□□□□ -1.06
USP35Q9P2H5 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 RN7SL165P-201ENST00000477476 291 ntBASIC8.46□□□□□ -1.06
USP35Q9P2H5 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
USP35Q9P2H5 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
USP35Q9P2H5 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 OR7E18P-201ENST00000592589 702 ntBASIC8.46□□□□□ -1.06
USP35Q9P2H5 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
USP35Q9P2H5 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 BUB1P1-201ENST00000603541 607 ntBASIC8.46□□□□□ -1.06
USP35Q9P2H5 AC016542.1-201ENST00000608259 493 ntBASIC8.46□□□□□ -1.06
USP35Q9P2H5 AC108673.3-201ENST00000609183 335 ntBASIC8.46□□□□□ -1.06
USP35Q9P2H5 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
USP35Q9P2H5 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC8.46□□□□□ -1.06
USP35Q9P2H5 MAPK10-287ENST00000641217 3037 ntBASIC8.46□□□□□ -1.06
USP35Q9P2H5 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.45□□□□□ -1.06
USP35Q9P2H5 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
USP35Q9P2H5 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
USP35Q9P2H5 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USP35Q9P2H5 DOCK11P1-201ENST00000553480 5932 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
USP35Q9P2H5 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USP35Q9P2H5 MIR937-201ENST00000401271 86 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 AL391361.1-201ENST00000405580 489 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC8.45□□□□□ -1.06
USP35Q9P2H5 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC8.45□□□□□ -1.06
USP35Q9P2H5 AC130360.1-201ENST00000425489 1117 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 AL121776.1-201ENST00000429337 372 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 SDR42E1P3-201ENST00000438345 502 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC8.45□□□□□ -1.06
USP35Q9P2H5 AC064862.4-201ENST00000442180 334 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC8.45□□□□□ -1.06
USP35Q9P2H5 ZNF736P6Y-201ENST00000447526 1213 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 AP006222.1-205ENST00000450734 457 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 EIF4A2P2-201ENST00000455776 1070 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 LARP7P4-201ENST00000481075 878 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 RN7SL714P-201ENST00000487050 298 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 AL136038.1-201ENST00000497246 351 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 RNA5SP362-201ENST00000516048 118 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 RNA5SP434-201ENST00000516647 121 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC8.45□□□□□ -1.06
USP35Q9P2H5 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.45□□□□□ -1.06
USP35Q9P2H5 IGHV4-55-201ENST00000520889 368 ntBASIC8.45□□□□□ -1.06
USP35Q9P2H5 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms