Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 RNA5SP433-201ENST00000364491 114 ntBASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 CXADRP1-201ENST00000398098 1095 ntBASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 MIR1203-201ENST00000408812 85 ntBASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 TUBB4BP6-201ENST00000437576 479 ntBASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 RPL12P39-201ENST00000455456 496 ntBASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 WBP1LP3-201ENST00000523033 208 ntBASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 OR7E10P-201ENST00000526420 991 ntBASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 DUX4L52-201ENST00000549363 777 ntBASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 AL583832.1-201ENST00000603227 784 ntBASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 AC108865.2-201ENST00000606881 432 ntBASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 CXADRP3-202ENST00000617265 1100 ntBASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 AC022919.1-201ENST00000624979 626 ntBASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
BLOC1S4Q9NUP1 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AC003985.2-201ENST00000562268 1669 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 RNU6-670P-201ENST00000364312 104 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 SUGT1P2-201ENST00000379452 992 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 MIR7-1-201ENST00000384871 110 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 RN7SKP240-201ENST00000410583 375 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 RNU6-564P-201ENST00000410983 104 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 RNU2-18P-201ENST00000411224 162 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 RNU2-22P-201ENST00000411266 212 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 MRPL53P1-201ENST00000414323 319 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AL590399.2-201ENST00000427536 309 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AC079080.1-201ENST00000479841 822 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AC091544.1-201ENST00000484702 348 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 RN7SL57P-201ENST00000493687 290 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AC114781.3-201ENST00000512083 142 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 RNA5SP116-201ENST00000516132 98 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 RN7SKP34-201ENST00000516142 244 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AC245128.3-201ENST00000594721 748 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AP001267.4-201ENST00000602598 545 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AC067838.1-201ENST00000606064 577 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AC020658.4-201ENST00000613987 684 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 MIR6071-201ENST00000616741 78 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 FO681491.1-202ENST00000623392 737 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 AC087565.3-202ENST00000642085 1603 ntBASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
BLOC1S4Q9NUP1 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms