Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
UPF3BQ9BZI7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 TMSB4XP4-201ENST00000323496 618 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 OR7E25P-201ENST00000344844 931 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 RN7SKP29-201ENST00000410957 272 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 RN7SKP279-201ENST00000411383 298 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 MTND6P12-201ENST00000428247 522 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 AK3P5-201ENST00000432033 519 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 AL161636.2-201ENST00000445179 927 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 SBDSP1-204ENST00000453858 737 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 RNU1-88P-201ENST00000459274 128 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 PSMA2P2-201ENST00000504319 686 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 PRMT5P1-201ENST00000514351 598 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 SNORD46.2-201ENST00000516021 102 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 AC079905.1-201ENST00000549280 475 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 AC006530.1-201ENST00000555980 571 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 RPA2P1-201ENST00000556557 721 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 HIRAP1-201ENST00000605318 787 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 AC140479.2-201ENST00000421567 3130 ntBASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
UPF3BQ9BZI7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 TMSB4XP2-201ENST00000335179 210 ntBASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 MIR937-201ENST00000401271 86 ntBASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 LYPLA1P3-201ENST00000402650 695 ntBASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 AC016739.1-201ENST00000405359 345 ntBASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 RN7SL193P-201ENST00000491708 276 ntBASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 AL163952.1-202ENST00000569625 600 ntBASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 BNIP3P32-201ENST00000600015 554 ntBASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 AL136131.3-201ENST00000607600 188 ntBASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 AL035661.1-201ENST00000620459 1144 ntBASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 AC114774.1-201ENST00000507410 1770 ntBASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
UPF3BQ9BZI7 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 RNA5SP500-201ENST00000364486 119 ntBASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 SUGT1P2-201ENST00000379452 992 ntBASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AL357752.1-201ENST00000412817 349 ntBASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 DEFA9P-201ENST00000433042 285 ntBASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 RN7SL273P-201ENST00000481561 299 ntBASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 DUTP1-201ENST00000493631 470 ntBASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AC006499.4-201ENST00000510947 694 ntBASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms